Lu Shanyun, Smith Craig D, Yang Zhengrong, Pruett Pamela S, Nagy Lisa, McCombs Deborah, Delucas Lawrence J, Brouillette Wayne J, Brouillette Christie G
Center for Biophysical Sciences and Engineering, University of Alabama at Birmingham, Birmingham, Alabama 35294-4400, USA.
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Oct 1;64(Pt 10):893-8. doi: 10.1107/S1744309108029102. Epub 2008 Sep 30.
Nicotinic acid mononucleotide adenylyltransferase (NaMNAT; EC 2.7.7.18) is the penultimate enzyme in the biosynthesis of NAD(+) and catalyzes the adenylation of nicotinic acid mononucleotide (NaMN) by ATP to form nicotinic acid adenine dinucleotide (NaAD). This enzyme is regarded as a suitable candidate for antibacterial drug development; as such, Bacillus anthracis NaMNAT (BA NaMNAT) was heterologously expressed in Escherichia coli for the purpose of inhibitor discovery and crystallography. The crystal structure of BA NaMNAT was determined by molecular replacement, revealing two dimers per asymmetric unit, and was refined to an R factor and R(free) of 0.228 and 0.263, respectively, at 2.3 A resolution. The structure is very similar to that of B. subtilis NaMNAT (BS NaMNAT), which is also a dimer, and another independently solved structure of BA NaMNAT recently released from the PDB along with two ligated forms. Comparison of these and other less related bacterial NaMNAT structures support the presence of considerable conformational heterogeneity and flexibility in three loops surrounding the substrate-binding area.
烟酰胺单核苷酸腺苷酸转移酶(NaMNAT;EC 2.7.7.18)是NAD(+)生物合成过程中的倒数第二个酶,催化ATP将烟酰胺单核苷酸(NaMN)腺苷化形成烟酰胺腺嘌呤二核苷酸(NaAD)。该酶被认为是抗菌药物开发的合适候选对象;因此,为了发现抑制剂和进行晶体学研究,炭疽芽孢杆菌NaMNAT(BA NaMNAT)在大肠杆菌中进行了异源表达。通过分子置换确定了BA NaMNAT的晶体结构,结果显示每个不对称单元中有两个二聚体,在2.3 Å分辨率下,最终的R因子和R(free)分别为0.228和0.263。该结构与枯草芽孢杆菌NaMNAT(BS NaMNAT)的结构非常相似,后者也是二聚体,并且是最近从蛋白质数据银行(PDB)发布的BA NaMNAT的另一个独立解析结构以及两种连接形式之一。对这些结构以及其他相关性较低的细菌NaMNAT结构的比较表明,在底物结合区域周围的三个环中存在相当大的构象异质性和灵活性。