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模型肽中半胱氨酸硫自由基与甘氨酸和丙氨酸之间的可逆分子内氢转移:源自脉冲辐解和激光闪光光解的绝对速率常数

Reversible intramolecular hydrogen transfer between cysteine thiyl radicals and glycine and alanine in model peptides: absolute rate constants derived from pulse radiolysis and laser flash photolysis.

作者信息

Nauser Thomas, Casi Giulio, Koppenol Willem H, Schöneich Christian

机构信息

Institute of Inorganic Chemistry and Institute of Organic Chemistry, Department of Chemistry and Applied Biosciences, ETH Zürich, 8093 Zürich, Switzerland.

出版信息

J Phys Chem B. 2008 Nov 27;112(47):15034-44. doi: 10.1021/jp805133u.

Abstract

The intramolecular reaction of cysteine thiyl radicals with peptide and protein alphaC-H bonds represents a potential mechanism for irreversible protein oxidation. Here, we have measured absolute rate constants for these reversible hydrogen transfer reactions by means of pulse radiolysis and laser flash photolysis of model peptides. For N-Ac-CysGly6 and N-Ac-CysGly2AspGly3, Cys thiyl radicals abstract hydrogen atoms from Gly with k(f) = (1.0-1.1 x 10(5) s(-1), generating carbon-centered radicals, while the reverse reaction proceeds with k(r) = (8.0-8.9) x 10(5) s(-1). The forward reaction shows a normal kinetic isotope effect of k(H)/k(D) = 6.9, while the reverse reaction shows a significantly higher normal kinetic isotope effect of 17.6, suggesting a contribution of tunneling. For N-Ac-CysAla2AspAla3, cysteine thiyl radicals abstract hydrogen atoms from Ala with k(f) = (0.9-1.0) x 10(4) s(-1), while the reverse reaction proceeds with k(r) = 1.0 x 10(5) s(-1). The order of reactivity, Gly > Ala, is in accord with previous studies on intermolecular reactions of thiyl radicals with these amino acids. The fact that k(f) < k(r) suggests some secondary structure of the model peptides, which prevents the adoption of extended conformations, for which calculations of homolytic bond dissociation energies would have predicted k(f) > k(r). Despite k(f) < k(r), model calculations show that intramolecular hydrogen abstraction by Cys thiyl radicals can lead to significant oxidation of other amino acids in the presence of physiologic oxygen concentrations.

摘要

半胱氨酸硫自由基与肽和蛋白质αC-H键的分子内反应代表了蛋白质不可逆氧化的一种潜在机制。在此,我们通过对模型肽进行脉冲辐解和激光闪光光解,测量了这些可逆氢转移反应的绝对速率常数。对于N-Ac-CysGly6和N-Ac-CysGly2AspGly3,半胱氨酸硫自由基以k(f) = (1.0 - 1.1×10⁵ s⁻¹)从甘氨酸中夺取氢原子,生成碳中心自由基,而逆反应的速率常数为k(r) = (8.0 - 8.9)×10⁵ s⁻¹。正向反应显示出正常的动力学同位素效应,k(H)/k(D) = 6.9,而逆反应显示出显著更高的正常动力学同位素效应,为17.6,表明存在隧穿效应。对于N-Ac-CysAla2AspAla3,半胱氨酸硫自由基以k(f) = (0.9 - 1.0)×10⁴ s⁻¹从丙氨酸中夺取氢原子,而逆反应的速率常数为k(r) = 1.0×10⁵ s⁻¹。反应活性顺序为甘氨酸>丙氨酸,这与之前关于硫自由基与这些氨基酸的分子间反应的研究一致。k(f) < k(r) 这一事实表明模型肽具有某种二级结构,该结构阻止了肽链采取伸展构象,而对于伸展构象,通过计算均裂键解离能预测k(f) > k(r)。尽管k(f) < k(r),但模型计算表明,在生理氧浓度存在的情况下,半胱氨酸硫自由基的分子内氢夺取反应可导致其他氨基酸的显著氧化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/011c/2662404/4a5d35c5f041/nihms73469f1.jpg

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