Park Sae W, Park Sang T, Lee Jung E, Kim Young M
Molecular Microbiology Laboratory, Department of Biology, Yonsei University, Seoul 120-749, Republic of Korea.
Int J Syst Evol Microbiol. 2008 Nov;58(Pt 11):2475-8. doi: 10.1099/ijs.0.65765-0.
A bacterial strain, Y8(T), capable of oxidizing carbon monoxide, was isolated from a soil sample collected from a roadside in Seoul, Korea. On the basis of 16S rRNA gene sequence similarity analyses, strain Y8(T) was shown to belong to the genus Pseudonocardia and was related most closely to the type strain of Pseudonocardia alni (99.6 % similarity). The cells were aerobic and stained Gram-positive, with white aerial mycelium and brown substrate mycelium. The predominant fatty acids were 16 : 0 iso and 16 : 1 iso. The cell-wall peptidoglycan of strain Y8(T) contained meso-diaminopimelic acid. The DNA G+C content was 77 mol%. Strain Y8(T) contained MK-9 as the major menaquinone, which is different from the major menaquinone reported previously in the genus Pseudonocardia, MK-8(H(4)). DNA-DNA relatedness between strain Y8(T) and the type strains of P. alni and Pseudonocardia antarctica was respectively 10 and 63 %. Based on phylogenetic, morphological and chemotaxonomic evidence, it is proposed that strain Y8(T) (=KCCM 42678(T) =JCM 14827(T)) be classified as the type strain of a novel species, Pseudonocardia carboxydivorans sp. nov. An emended description of the genus Pseudonocardia is also presented.
从韩国首尔路边采集的土壤样本中分离出一株能够氧化一氧化碳的细菌菌株Y8(T)。基于16S rRNA基因序列相似性分析,菌株Y8(T)被证明属于假诺卡氏菌属,与桤木假诺卡氏菌模式菌株关系最为密切(相似性为99.6%)。细胞为需氧型,革兰氏染色呈阳性,有白色气生菌丝和棕色基内菌丝。主要脂肪酸为16 : 0异戊酸和16 : 1异戊酸。菌株Y8(T)的细胞壁肽聚糖含有内消旋二氨基庚二酸。DNA G+C含量为77 mol%。菌株Y8(T)含有MK-9作为主要甲基萘醌,这与假诺卡氏菌属先前报道的主要甲基萘醌MK-8(H(4))不同。菌株Y8(T)与桤木假诺卡氏菌和南极假诺卡氏菌模式菌株之间的DNA-DNA相关性分别为10%和63%。基于系统发育、形态学和化学分类学证据,建议将菌株Y8(T)(=KCCM 42678(T)=JCM 14827(T))分类为一个新物种——羧基氧化假诺卡氏菌的模式菌株。同时还给出了假诺卡氏菌属的修订描述。