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从盐渍土壤中分离出的新种盐土盐微菌及盐微菌属的修订描述。

Salinimicrobium terrae sp. nov., isolated from saline soil, and emended description of the genus Salinimicrobium.

作者信息

Chen Yi-Guang, Cui Xiao-Long, Zhang Yu-Qin, Li Wen-Jun, Wang Yong-Xia, Kim Chang-Jin, Lim Jee-Min, Xu Li-Hua, Jiang Cheng-Lin

机构信息

Yunnan Institute of Microbiology, Yunnan University, Kunming, Yunnan 650091, PR China.

出版信息

Int J Syst Evol Microbiol. 2008 Nov;58(Pt 11):2501-4. doi: 10.1099/ijs.0.65860-0.

Abstract

A novel yellow-pigmented, Gram-negative, slightly halophilic, catalase-positive, oxidase-negative, obligately aerobic bacterium, designated strain YIM-C338(T), was isolated from saline soil from the Qaidam Basin in north-west China. Cells were non-sporulating, non-motile, short rods, predominantly occurring singly. Coccoid bodies and slightly curved rod-shaped cells of varying length developed in older cultures. Growth occurred with 0.5-8 % (w/v) NaCl (optimally with 1-3 %, w/v), at pH 6.0-9.0 (optimally at pH 7.0) and at 4-37 degrees C (optimally at 28 degrees C). The major cellular fatty acids were C(16 : 0), C(18 : 0), C(16 : 1)omega7c, C(18 : 1)omega7c, iso-C(13 : 0) 3-OH and iso-C(15 : 1). MK-6 was the only respiratory quinone. Non-diffusible carotenoid pigments were produced. Flexirubin-type pigments were absent. The genomic DNA G+C content was 42.8 mol%. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain YIM-C338(T) was a member of the genus Salinimicrobium, having sequence similarities of 97.3 and 94.0 % with respect to Salinimicrobium xinjiangense BH206(T) and Salinimicrobium catena HY1(T). The combination of the phylogenetic data, phenotypic characteristics and chemotaxonomic differences supported the view that strain YIM-C338(T) represents a novel species of the genus Salinimicrobium, for which the name Salinimicrobium terrae sp. nov. is proposed. The type strain is YIM-C338(T) (=DSM 17865(T) =CGMCC 1.6308(T)). An emended description of the genus Salinimicrobium is also provided.

摘要

从中国西北部柴达木盆地的盐土中分离出一株新型黄色色素、革兰氏阴性、轻度嗜盐、过氧化氢酶阳性、氧化酶阴性、专性需氧细菌,命名为菌株YIM-C338(T)。细胞不产芽孢、无运动性、短杆状,主要单个存在。在较老培养物中会出现球状细胞和不同长度的轻度弯曲杆状细胞。在含0.5-8%(w/v)NaCl(最适为1-3%,w/v)、pH 6.0-9.0(最适pH 7.0)和4-37℃(最适28℃)条件下生长。主要细胞脂肪酸为C(16 : 0)、C(18 : 0)、C(16 : 1)ω7c、C(18 : 1)ω7c、异-C(13 : 0) 3-OH和异-C(15 : 1)。MK-6是唯一的呼吸醌。产生不可扩散的类胡萝卜素色素。不存在柔韧红素类色素。基因组DNA G+C含量为42.8 mol%。基于16S rRNA基因序列的系统发育分析表明,菌株YIM-C338(T)是盐微菌属的成员,与新疆盐微菌BH206(T)和链状盐微菌HY1(T)的序列相似性分别为97.3%和94.0%。系统发育数据、表型特征和化学分类学差异的综合结果支持菌株YIM-C338(T)代表盐微菌属一个新物种的观点,为此提出新物种名称盐土盐微菌(Salinimicrobium terrae sp. nov.)。模式菌株为YIM-C338(T)(=DSM 17865(T) =CGMCC 1.6308(T))。还提供了盐微菌属的修订描述。

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