Urdinguio Rocio G, Lopez-Serra Lidia, Lopez-Nieva Pilar, Alaminos Miguel, Diaz-Uriarte Ramon, Fernandez Agustin F, Esteller Manel
Cancer Epigenetics Laboratory, Spanish National Cancer Research Centre (CNIO), Madrid, Spain.
PLoS One. 2008;3(11):e3669. doi: 10.1371/journal.pone.0003669. Epub 2008 Nov 7.
Rett syndrome (RTT) is a complex neurological disorder that is one of the most frequent causes of mental retardation in women. A great landmark in research in this field was the discovery of a relationship between the disease and the presence of mutations in the gene that codes for the methyl-CpG binding protein 2 (MeCP2). Currently, MeCP2 is thought to act as a transcriptional repressor that couples DNA methylation and transcriptional silencing. The present study aimed to identify new target genes regulated by Mecp2 in a mouse model of RTT.
METHODOLOGY/PRINCIPAL FINDINGS: We have compared the gene expression profiles of wild type (WT) and Mecp2-null (KO) mice in three regions of the brain (cortex, midbrain, and cerebellum) by using cDNA microarrays. The results obtained were confirmed by quantitative real-time PCR. Subsequent chromatin immunoprecipitation assays revealed seven direct target genes of Mecp2 bound in vivo (Fkbp5, Mobp, Plagl1, Ddc, Mllt2h, Eya2, and S100a9), and three overexpressed genes due to an indirect effect of a lack of Mecp2 (Irak1, Prodh and Dlk1). The regions bound by Mecp2 were always methylated, suggesting the involvement of the methyl-CpG binding domain of the protein in the mechanism of interaction.
We identified new genes that are overexpressed in Mecp2-KO mice and are excellent candidate genes for involvement in various features of the neurological disease. Our results demonstrate new targets of MeCP2 and provide us with a better understanding of the underlying mechanisms of RTT.
雷特综合征(RTT)是一种复杂的神经紊乱疾病,是女性智力迟钝最常见的病因之一。该领域研究的一个重大里程碑是发现了这种疾病与编码甲基化CpG结合蛋白2(MeCP2)的基因突变之间的关系。目前,MeCP2被认为是一种转录抑制因子,它将DNA甲基化与转录沉默联系起来。本研究旨在确定在雷特综合征小鼠模型中受Mecp2调控的新靶基因。
方法/主要发现:我们通过使用cDNA微阵列比较了野生型(WT)和Mecp2基因敲除(KO)小鼠在大脑三个区域(皮质、中脑和小脑)的基因表达谱。所得结果通过定量实时PCR得到证实。随后的染色质免疫沉淀分析揭示了体内与Mecp2结合的七个直接靶基因(Fkbp5、Mobp、Plagl1、Ddc、Mllt2h、Eya2和S100a9),以及由于缺乏Mecp2的间接作用而过度表达的三个基因(Irak1、Prodh和Dlk1)。Mecp2结合的区域总是甲基化的,这表明该蛋白的甲基化CpG结合结构域参与了相互作用机制。
我们鉴定出了在Mecp2基因敲除小鼠中过度表达的新基因,这些基因是参与神经疾病各种特征的优秀候选基因。我们的结果证明了MeCP2的新靶点,并使我们对雷特综合征的潜在机制有了更好的理解。