Nakamura A, Fukumori F, Horinouchi S, Masaki H, Kudo T, Uozumi T, Horikoshi K, Beppu T
Department of Biotechnology, Faculty of Agriculture, University of Tokyo, Japan.
J Biol Chem. 1991 Jan 25;266(3):1579-83.
The amino acid sequences of cellulase from Bacillus subtilis (BSC) and that from an alkalophilic Bacillus sp. N-4 (NK1) show significant homology in most parts except for the C-terminal portions. Despite the high homology, the pH activity profiles of the two enzymes are quite different; BSC has its optimum pH at 6-6.5, whereas NK1 is active over a broad pH range from 6 to 10.5. In order to identify the structural features which determine such pH activity profiles, chimeric cellulases between BSC and NK1 were constructed using four restriction sites commonly present within the homologous coding sequences, and were produced in Escherichia coli. The chimeric cellulases showed various chromatographic behaviors, reflecting the origins of their C-terminal regions. The pH activity profiles of the chimeric enzymes in the alkaline range could be classified into either the BSC or NK1 type mainly depending on the origins of the fifth C-terminal regions. In the acidic range, the profile was determined only by the origin of the fourth enzyme region from the N terminus. Comparison of the kinetic parameters between pH 5 and 6 using p-nitrophenyl cellobioside as a substrate indicated that the fourth region is responsible for the pH-dependent change of the kcat value. Only a limited number of amino acids in the fourth region may affect on deprotonation of catalytic residues of the cellulases and modulate the catalytic activity in the acidic pH values.
枯草芽孢杆菌(BSC)纤维素酶和嗜碱芽孢杆菌N-4(NK1)纤维素酶的氨基酸序列在大部分区域显示出显著的同源性,但C端部分除外。尽管同源性很高,但这两种酶的pH活性曲线却大不相同;BSC的最适pH为6 - 6.5,而NK1在6至10.5的宽pH范围内均有活性。为了确定决定这种pH活性曲线的结构特征,利用同源编码序列中常见的四个限制性位点构建了BSC和NK1之间的嵌合纤维素酶,并在大肠杆菌中表达。嵌合纤维素酶表现出各种色谱行为,反映了其C端区域的来源。碱性范围内嵌合酶的pH活性曲线主要根据第五个C端区域的来源可分为BSC型或NK1型。在酸性范围内,曲线仅由N端起第四个酶区域的来源决定。以对硝基苯基纤维二糖为底物比较pH 5和6之间的动力学参数表明,第四个区域负责kcat值的pH依赖性变化。第四个区域中只有有限数量的氨基酸可能影响纤维素酶催化残基的去质子化,并在酸性pH值下调节催化活性。