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化学空间映射在解释结晶筛选结果中的应用与使用。

The application and use of chemical space mapping to interpret crystallization screening results.

作者信息

Snell Edward H, Nagel Ray M, Wojtaszcyk Ann, O'Neill Hugh, Wolfley Jennifer L, Luft Joseph R

机构信息

Hauptman-Woodward Medical Research Institute, 700 Ellicott Street, Buffalo, NY 14203, USA.

出版信息

Acta Crystallogr D Biol Crystallogr. 2008 Dec;64(Pt 12):1240-9. doi: 10.1107/S0907444908032411. Epub 2008 Nov 18.

Abstract

Macromolecular crystallization screening is an empirical process. It often begins by setting up experiments with a number of chemically diverse cocktails designed to sample chemical space known to promote crystallization. Where a potential crystal is seen a refined screen is set up, optimizing around that condition. By using an incomplete factorial sampling of chemical space to formulate the cocktails and presenting the results graphically, it is possible to readily identify trends relevant to crystallization, coarsely sample the phase diagram and help guide the optimization process. In this paper, chemical space mapping is applied to both single macromolecules and to a diverse set of macromolecules in order to illustrate how visual information is more readily understood and assimilated than the same information presented textually.

摘要

大分子结晶筛选是一个经验性过程。它通常始于使用多种化学性质不同的混合液进行实验,这些混合液旨在对已知能促进结晶的化学空间进行采样。当观察到潜在晶体时,就会围绕该条件建立一个优化的筛选体系。通过使用化学空间的不完全因子抽样来配制混合液,并以图形方式呈现结果,就能够轻松识别与结晶相关的趋势,粗略地对相图进行采样,并有助于指导优化过程。在本文中,化学空间映射被应用于单个大分子以及一组多样的大分子,以说明视觉信息比以文本形式呈现的相同信息更容易理解和吸收。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1bac/2644911/f5d16cc5ad7a/d-64-01240-fig1.jpg

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