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非血红素铁(II)依赖性酶中2-组氨酸-1-羧酸盐和3-组氨酸金属中心的结构与功能比较

Structural and functional comparison of 2-His-1-carboxylate and 3-His metallocentres in non-haem iron(II)-dependent enzymes.

作者信息

Leitgeb Stefan, Nidetzky Bernd

机构信息

Institute of Biotechnology and Biochemical Engineering, Graz University of Technology, Graz, Austria.

出版信息

Biochem Soc Trans. 2008 Dec;36(Pt 6):1180-6. doi: 10.1042/BST0361180.

Abstract

The canonical structural motif for co-ordination of non-haem ferrous iron in metal-dependent oxygenases is a facial triad of two histidine residues and one aspartate or glutamate residue. This so-called 2-His-1-carboxylate metallocentre is often accommodated in a double-stranded beta-helix fold with the iron-co-ordinating residues located in the rigid core structure of the protein. At the sequence level, the metal ligands are arranged in a HXD/E...H motif (where the distance between the conserved histidine residues is variable). Interestingly, cysteine dioxygenase, among a growing number of other iron(II) oxygenases, has the carboxylate residue replaced by another histidine. In the present review, we compare the properties of 3-His and 2-His-1-carboxylate sites based on current evidence from high-resolution crystal structures, spectroscopic characterization of the metal centres and results from mutagenesis studies. Although the overall conformation of the two metal sites is quite similar, the carboxylate residue seems to accommodate a slightly closer co-ordination distance than the counterpart histidine. The ability of the 2-His-1-carboxylate site to fit a site-directed substitution by an alternatively co-ordinating or non-co-ordinating residue with retention of metal-binding capacity and catalytic function varies among different enzymes. However, replacement by histidine disrupted the activity in the three iron(II) oxygenases examined so far.

摘要

在金属依赖性加氧酶中,非血红素亚铁配位的典型结构基序是由两个组氨酸残基和一个天冬氨酸或谷氨酸残基组成的面三联体。这种所谓的2-组氨酸-1-羧酸盐金属中心通常容纳在双链β-螺旋折叠中,铁配位残基位于蛋白质的刚性核心结构中。在序列水平上,金属配体以HXD/E...H基序排列(其中保守组氨酸残基之间的距离是可变的)。有趣的是,在越来越多的其他铁(II)加氧酶中,半胱氨酸双加氧酶的羧酸盐残基被另一个组氨酸取代。在本综述中,我们根据来自高分辨率晶体结构的现有证据、金属中心的光谱表征以及诱变研究的结果,比较了3-组氨酸和2-组氨酸-1-羧酸盐位点的性质。尽管两个金属位点的整体构象非常相似,但羧酸盐残基似乎比对应的组氨酸容纳的配位距离略近。2-组氨酸-1-羧酸盐位点通过交替配位或非配位残基进行定点取代并保留金属结合能力和催化功能的能力在不同酶之间有所不同。然而,到目前为止,在所研究的三种铁(II)加氧酶中,用组氨酸取代会破坏其活性。

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