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单核非血红素铁II加氧酶中2-组氨酸-1-羧酸盐模式的变体

Variations of the 2-His-1-carboxylate theme in mononuclear non-heme FeII oxygenases.

作者信息

Straganz G D, Nidetzky B

机构信息

Institute of Biotechnology and Biochemical Engineering Graz University of Technology Petersgasse 12/I, 8010 Graz, Austria.

出版信息

Chembiochem. 2006 Oct;7(10):1536-48. doi: 10.1002/cbic.200600152.

Abstract

A facial triad of two histidine side chains and one aspartate or glutamate side chain forms the canonical metal-coordinating motif in the catalytic centers of various mononuclear non-heme Fe(II) enzymes. Although these active sites are based on totally unrelated protein folds and bring about a wide range of chemical transformations, most of them share the ability to couple dioxygen reduction with the oxygenation of an organic substrate. With the increasing number of protein structures now solved, it has become clear that the 2-His-1-carboxylate signature is less of a paradigm for non-heme Fe(II) active sites than had long been thought and that it can be replaced by alternative metal centers in various oxygenases, the structure-function relationships and proposed catalytic mechanisms of which are reviewed here. Metal coordination through three histidines and one glutamate constitutes the classical motif described for enzyme members of the cupin protein superfamily, such as aci-reductone dioxygenase and quercetin dioxygenase, multiple metal forms of which (including the Fe(II) type) are found in nature. Cysteine dioxygenase and diketone dioxygenase, which are strictly Fe(II)-dependent oxygenases based on the cupin fold, bind the catalytic metal through the homologous triad of histidines, but lack the fourth glutamate ligand. An alpha-ketoglutarate-dependent Fe(II) halogenase shows metal coordination by two histidines as the only protein-derived ligands, whilst carotene oxygenase, from a different protein fold family, features an Fe(II) site consisting of four histidine side chains. These recently discovered metallocenters are discussed with respect to their metal-binding properties and the reaction coordinates of the O(2)-dependent conversions they catalyze.

摘要

由两个组氨酸侧链和一个天冬氨酸或谷氨酸侧链组成的面部三联体在各种单核非血红素铁(II)酶的催化中心形成了典型的金属配位基序。尽管这些活性位点基于完全不相关的蛋白质折叠,并能实现广泛的化学转化,但它们中的大多数都具有将双氧还原与有机底物的氧化作用相偶联的能力。随着现已解析出的蛋白质结构数量不断增加,很明显,2-组氨酸-1-羧酸盐特征对于非血红素铁(II)活性位点而言,并不像长期以来所认为的那样是一种范例,并且在各种加氧酶中它可以被替代金属中心所取代,本文将对这些加氧酶的结构-功能关系及提出的催化机制进行综述。通过三个组氨酸和一个谷氨酸进行金属配位构成了对豆球蛋白蛋白质超家族酶成员所描述的经典基序,例如酸式还原酮双加氧酶和槲皮素双加氧酶,在自然界中发现了它们的多种金属形式(包括铁(II)类型)。半胱氨酸双加氧酶和二酮双加氧酶是基于豆球蛋白折叠的严格依赖铁(II)的加氧酶,它们通过组氨酸的同源三联体结合催化金属,但缺少第四个谷氨酸配体。一种依赖α-酮戊二酸的铁(II)卤化酶显示出由两个组氨酸作为仅有的蛋白质衍生配体进行金属配位,而来自不同蛋白质折叠家族的胡萝卜素加氧酶具有一个由四个组氨酸侧链组成的铁(II)位点。本文将针对这些最近发现的金属中心的金属结合特性以及它们所催化的依赖氧气的转化反应坐标进行讨论。

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