Coppock Patrick S, Kindt James T
Emory University, Department of Chemistry, 1515 Dickey Drive, Atlanta, Georgia 30322, USA.
Langmuir. 2009 Jan 6;25(1):352-9. doi: 10.1021/la802712q.
The slow rate of diffusive mixing poses a challenge for molecular dynamics (MD) simulation studies of mixed-lipid bilayers. A mixed Monte Carlo-molecular dynamics (MC-MD) approach, which uses mutation moves to swap lipid types throughout the system within the semi-grand canonical ensemble, is here applied to a comparison of binary mixtures in the gel and liquid crystalline phases. The two lipid components modeled, distearoylphosphatidylcholine (DSPC) and dimyristoylphosphatidylcholine (DMPC), differ by four carbons in the lengths of their acyl tails and are investigated here at full hydration at a temperature (313 K) between their transition temperatures, where coexistence between a DSPC-rich gel phase and a DMPC-rich liquid crystalline phase is expected. An analysis of DSPC-DMPC mixtures in the gel phase indicates strong deviation from ideality in the thermodynamics of mixing, accompanied by a tendency of the shorter-tailed component DMPC to associate laterally and for DMPC headgroups to be displaced toward the bilayer midplane. The liquid crystal phase mixtures, in contrast, show more mild deviation from thermodynamically ideal mixing with no apparent tendency for similar lipids to cluster laterally and no difference in headgroup normal distribution profiles.
扩散混合的缓慢速率对混合脂质双层的分子动力学(MD)模拟研究构成了挑战。一种混合蒙特卡罗 - 分子动力学(MC - MD)方法,即在半巨正则系综中使用突变移动来在整个系统中交换脂质类型,在此应用于凝胶相和液晶相二元混合物的比较。所模拟的两种脂质成分,二硬脂酰磷脂酰胆碱(DSPC)和二肉豆蔻酰磷脂酰胆碱(DMPC),其酰基尾部长度相差四个碳原子,并且在此在它们转变温度之间的一个温度(313 K)下完全水合状态下进行研究,预计在该温度下富含DSPC的凝胶相和富含DMPC的液晶相共存。对凝胶相中的DSPC - DMPC混合物的分析表明,混合热力学严重偏离理想状态,伴随着较短尾部成分DMPC横向缔合的趋势以及DMPC头基团向双层中间平面位移的趋势。相比之下,液晶相混合物显示出与热力学理想混合的偏差更为温和,没有类似脂质横向聚集的明显趋势,并且头基团正态分布轮廓没有差异。