Viant Mark R
School of Biosciences, The University of Birmingham, Edgbaston, Birmingham, UKB15 2TT.
Mol Biosyst. 2008 Oct;4(10):980-6. doi: 10.1039/b805354e. Epub 2008 Aug 13.
Metabolomics is increasingly being used to characterise the interactions of organisms with their natural environment. This article describes the latest developments in this vibrant field. The first section highlights environmental studies that are exploiting recent technological advances in metabolomics, including developments in NMR spectroscopy and mass spectrometry, with a particular focus on toxicity testing in ecological risk assessment. Subsequently, recent laboratory studies of organism function and metabolic responses to stress are reviewed, including investigations of cold, heat and anoxic stress. The importance of model organisms and systems biology within environmental metabolomics is then highlighted. Finally, the first applications of metabolomics to actual field investigations are discussed, with a particular focus on environmental monitoring. During the past year, environmental metabolomics research has been conducted on more than 20 model and non-model species, including eight freshwater and marine fish, nine species of aquatic and terrestrial invertebrates, as well as plants and microbes, demonstrating the rapid growth of this field.
代谢组学正越来越多地用于表征生物体与其自然环境之间的相互作用。本文介绍了这一充满活力的领域的最新进展。第一部分重点介绍了利用代谢组学最新技术进展的环境研究,包括核磁共振光谱和质谱技术的发展,特别关注生态风险评估中的毒性测试。随后,回顾了近期关于生物体功能和对应激的代谢反应的实验室研究,包括对冷、热和缺氧应激的研究。接着强调了模式生物和系统生物学在环境代谢组学中的重要性。最后,讨论了代谢组学在实际野外调查中的首次应用,特别关注环境监测。在过去一年里,已经对20多种模式和非模式物种开展了环境代谢组学研究,包括8种淡水和海水鱼类、9种水生和陆生无脊椎动物,以及植物和微生物,这表明该领域正在迅速发展。