Thackham Jennifer A, McElwain D L Sean, Turner Ian W
School of Mathematical Sciences, Queensland University of Technology, GPO Box 2434, Brisbane, 4001, Australia.
Bull Math Biol. 2009 Jan;71(1):211-46. doi: 10.1007/s11538-008-9360-z. Epub 2008 Dec 11.
In the wound healing process, the cell movement associated with chemotaxis generally outweighs the movement associated with random motion, leading to advection-dominated mathematical models of wound healing. The equations in these models must be solved with care, but often inappropriate approaches are adopted. Two one-dimensional test problems arising from advection-dominated models of wound healing are solved using four algorithms--MATLAB's inbuilt routine pdepe.m, the Numerical Algorithms Group routine d03pcf.f, and two finite volume methods. The first finite volume method is based on a first-order upwinding treatment of chemotaxis terms and the second on a flux limiting approach. The first test problem admits an analytic solution which can be used to validate the numerical results by analyzing two measures of the error for each method: the average absolute difference and a mass balance error. These criteria as well as the visual comparison between the numerical methods and the exact solution lead us to conclude that flux limiting is the best approach to solving advection-dominated wound healing problems numerically in one dimension. The second test problem is a coupled nonlinear three species model of wound healing angiogenesis. Measurement of the mass balance error for this test problem further confirms our hypothesis that flux limiting is the most appropriate method for solving advection-dominated governing equations in wound healing models. We also consider two two-dimensional test problems arising from wound healing, one that admits an analytic solution and a more complicated problem of blood vessels growth into a devascularized wound bed. The results from the two-dimensional test problems also demonstrate that the flux limiting treatment of advective terms is ideal for an advection-dominated problem.
在伤口愈合过程中,与趋化作用相关的细胞运动通常比与随机运动相关的运动更为显著,这导致了以平流为主导的伤口愈合数学模型。这些模型中的方程必须谨慎求解,但常常采用了不恰当的方法。使用四种算法——MATLAB的内置程序pdepe.m、数值算法集团的程序d03pcf.f以及两种有限体积法,求解了两个源于以平流为主导的伤口愈合模型的一维测试问题。第一种有限体积法基于对趋化项的一阶迎风格式处理,第二种基于通量限制方法。第一个测试问题有一个解析解,可通过分析每种方法的两个误差度量来验证数值结果:平均绝对差和质量平衡误差。这些标准以及数值方法与精确解之间的直观比较使我们得出结论,通量限制是在一维情况下数值求解以平流为主导的伤口愈合问题的最佳方法。第二个测试问题是一个耦合的非线性三种群伤口愈合血管生成模型。对这个测试问题的质量平衡误差的测量进一步证实了我们的假设,即通量限制是求解伤口愈合模型中以平流为主导的控制方程的最合适方法。我们还考虑了两个源于伤口愈合的二维测试问题,一个有解析解,另一个是血管长入去血管化伤口床的更复杂问题。二维测试问题的结果也表明,对流项的通量限制处理对于以平流为主导的问题是理想的。