Eger Wilhelm A, Jahn Burkhard O, Anders Ernst
Institute of Organic Chemistry and Macromolecular Chemistry, Friedrich Schiller University Jena, Humboldtstrasse 10, 07743, Jena, Germany.
J Mol Model. 2009 Apr;15(4):433-46. doi: 10.1007/s00894-008-0385-x. Epub 2008 Dec 16.
Based upon our preceding studies of the hydration of CO(2), COS and CS(2), accelerated by the carbonic anhydrase (CA) using simplified ZnL(3)OH complexes as model catalysts, we calculated the hydration mechanisms of both the uncatalyzed and the ZnL(3)OH-catalyzed reactions (L = NH(3)) of isothiocyanates RNCS on the B3LYP/6-311+G(d,p) level of theory. Interestingly, the transition state for the favored metal mediated reaction with the lowest Gibbs free energy is only slightly higher than in the case of CO(2) (depending on the attacking atom (N or S). Calculations under inclusion of solvent corrections show a reduction of the selectivity and a slight decrease of the Gibbs free energy in the rate-determining steps. The most plausible pathway prefers the mechanism via a Lindskog proton-shift transition state leading to the thermodynamically most stable product, the carbamatic-S-acid. Furthermore, powerful electron withdrawing substituents R of the cumulenic substrates influence the selectivity of the reaction to a significant extent. Especially the CF(3)-group in trifluoromethylisothiocyanate reverses the selectivity. This investigation demonstrates that reaction principles developed by nature can be translated to develop efficient catalytic methods, in this case presumably for the transformation of a wide variety of heterocumulenes aside from CO(2), COS and CS(2).
基于我们之前对碳酸酐酶(CA)加速CO₂、COS和CS₂水合作用的研究,我们使用简化的ZnL₃OH配合物作为模型催化剂,在B3LYP/6 - 311 + G(d,p)理论水平上计算了异硫氰酸酯RNCS的非催化反应以及ZnL₃OH催化反应(L = NH₃)的水合机理。有趣的是,具有最低吉布斯自由能的有利金属介导反应的过渡态仅略高于CO₂的情况(取决于进攻原子(N或S))。包含溶剂校正的计算表明,在速率决定步骤中选择性降低且吉布斯自由能略有下降。最合理的途径倾向于通过林德斯科普质子转移过渡态的机理,生成热力学上最稳定的产物——氨基甲酸-S-酸。此外,累积烯底物中强大的吸电子取代基R在很大程度上影响反应的选择性。特别是三氟甲基异硫氰酸酯中的CF₃基团会使选择性反转。这项研究表明,自然界发展出的反应原理可以转化为开发高效的催化方法,在这种情况下,大概可用于除CO₂、COS和CS₂之外的多种杂累积烯的转化。