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鉴定一种阻止脱氢酶发挥氧化酶作用的守门残基。

Identification of a gatekeeper residue that prevents dehydrogenases from acting as oxidases.

作者信息

Leferink Nicole G H, Fraaije Marco W, Joosten Henk-Jan, Schaap Peter J, Mattevi Andrea, van Berkel Willem J H

机构信息

Laboratory of Biochemistry, Wageningen University, Dreijenlaan 3, 6703 HA Wageningen, The Netherlands.

出版信息

J Biol Chem. 2009 Feb 13;284(7):4392-7. doi: 10.1074/jbc.M808202200. Epub 2008 Dec 16.

DOI:10.1074/jbc.M808202200
PMID:19088070
Abstract

The oxygen reactivity of flavoproteins is poorly understood. Here we show that a single Ala to Gly substitution in l-galactono-gamma-lactone dehydrogenase (GALDH) turns the enzyme into a catalytically competent oxidase. GALDH is an aldonolactone oxidoreductase with a vanillyl-alcohol oxidase (VAO) fold. We found that nearly all oxidases in the VAO family contain either a Gly or a Pro at a structurally conserved position near the C4a locus of the isoalloxazine moiety of the flavin, whereas dehydrogenases prefer another residue at this position. Mutation of the corresponding residue in GALDH (Ala-113 --> Gly) resulted in a striking 400-fold increase in oxygen reactivity, whereas the cytochrome c reductase activity is retained. The activity of the A113G variant shows a linear dependence on oxygen concentration (k(ox) = 3.5 x 10(5) m(-1) s(-1)), similar to most other flavoprotein oxidases. The Ala-113 --> Gly replacement does not change the reduction potential of the flavin but creates space for molecular oxygen to react with the reduced flavin. In the wild-type enzyme, Ala-113 acts as a gatekeeper, preventing oxygen from accessing the isoalloxazine nucleus. The presence of such an oxygen access gate seems to be a key factor for the prevention of oxidase activity within the VAO family and is absent in members that act as oxidases.

摘要

黄素蛋白的氧反应性目前还了解得很少。在此我们表明,在L-半乳糖酸-γ-内酯脱氢酶(GALDH)中,单个丙氨酸到甘氨酸的取代将该酶转变为具有催化活性的氧化酶。GALDH是一种具有香草醇氧化酶(VAO)折叠结构的醛糖酸内酯氧化还原酶。我们发现,VAO家族中几乎所有的氧化酶在黄素异咯嗪部分C4a位点附近的一个结构保守位置含有甘氨酸或脯氨酸,而脱氢酶在该位置更喜欢另一种氨基酸。GALDH中相应残基(丙氨酸113突变为甘氨酸)的突变导致氧反应性显著增加400倍,而细胞色素c还原酶活性得以保留。A113G变体的活性对氧浓度呈线性依赖(k(ox) = 3.5 x 10(5) m(-1) s(-1)),这与大多数其他黄素蛋白氧化酶相似。丙氨酸113到甘氨酸的替换并没有改变黄素的还原电位,但为分子氧与还原型黄素反应创造了空间。在野生型酶中,丙氨酸113起到守门人的作用,阻止氧进入异咯嗪核。这种氧通道门的存在似乎是VAO家族中防止氧化酶活性的关键因素,而在作为氧化酶的成员中则不存在。

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