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细胞色素P450催化N-环丙基-N-甲基苯胺N-脱烷基化反应的理论研究:对区域选择性起源的洞察

Theoretical study of N-dealkylation of N-cyclopropyl-N-methylaniline catalyzed by cytochrome P450: insight into the origin of the regioselectivity.

作者信息

Li Dongmei, Wang Yong, Yang Chuanlu, Han Keli

机构信息

State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China.

出版信息

Dalton Trans. 2009 Jan 14(2):291-7. doi: 10.1039/b810767j. Epub 2008 Nov 19.

DOI:10.1039/b810767j
PMID:19089010
Abstract

The mechanism of N-dealkylation of N-cyclopropyl-N-methylaniline () catalyzed by cytochrome P450 (P450) was investigated using density functional theory. This reaction involves two steps. The first one is a Calpha-H hydroxylation on the N-substituent to form a carbinolaniline complex, and the second is a decomposition of the carbinolaniline to yield cyclopropanone (or formaldehyde) and N-methylaniline (or N-cyclopropylaniline). Our calculations demonstrate that the first step proceeds in a spin-selective mechanism (SSM), mostly on the low-spin (LS) doublet state. The rate-limiting Calpha-H activation is an isotope-sensitive hydrogen atom transfer (HAT) step. The environmental effect switches the regioselectivity of this reaction from a competition between N-decyclopropylation and N-demethylation to a clear preference for N-demethylation. This preference is consistent with former experimental studies. However, it is not in accord with the normal DeltaE-BDE correlation since the BDE of Calpha-H on the methyl group is higher than that on the cyclopropyl group. Insight into the origin of the preference for N-demethylation reveals that tertiary amine is different from normal hydrocarbons, possessing a unique piPh-piC-N conjugated system. The electron delocalization effect of the piPh-piC-N conjugated system in makes the transition state pose a polar character, and the bulk polarity and hydrogen bonding capability of the protein pocket can exert a remarkable effect on the regioselectivity of N-dealkylation of . Decomposition of carbinolaniline is a water-assisted proton-transfer process in the nonenzymatic environment. The ring-intact cyclopropanone formed in the reaction sheds some light on the inability of to inactivate P450 during its N-decyclopropylation.

摘要

利用密度泛函理论研究了细胞色素P450(P450)催化的N-环丙基-N-甲基苯胺()的N-脱烷基化反应机理。该反应包括两个步骤。第一步是N-取代基上的Cα-H羟基化反应,形成甲醇胺络合物,第二步是甲醇胺分解生成环丙酮(或甲醛)和N-甲基苯胺(或N-环丙基苯胺)。我们的计算表明,第一步以自旋选择性机制(SSM)进行,主要发生在低自旋(LS)双峰态。限速的Cα-H活化是一个同位素敏感的氢原子转移(HAT)步骤。环境效应将该反应的区域选择性从N-脱环丙基化和N-脱甲基化之间的竞争转变为明显偏向N-脱甲基化。这种偏向与以前的实验研究一致。然而,它不符合正常的ΔE-BDE相关性,因为甲基上Cα-H的BDE高于环丙基上的BDE。对N-脱甲基化偏好起源的深入研究表明,叔胺不同于普通烃类,具有独特的πPh-πC-N共轭体系。πPh-πC-N共轭体系中的电子离域效应使过渡态具有极性特征,蛋白质口袋的整体极性和氢键能力可对的N-脱烷基化区域选择性产生显著影响。在非酶环境中,甲醇胺的分解是一个水辅助的质子转移过程。反应中形成的环完整的环丙酮为在其N-脱环丙基化过程中无法使P450失活提供了一些线索。

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