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由于TACSTD1基因3'外显子缺失导致的林奇综合征家族中MSH2基因的可遗传体细胞甲基化和失活。

Heritable somatic methylation and inactivation of MSH2 in families with Lynch syndrome due to deletion of the 3' exons of TACSTD1.

作者信息

Ligtenberg Marjolijn J L, Kuiper Roland P, Chan Tsun Leung, Goossens Monique, Hebeda Konnie M, Voorendt Marsha, Lee Tracy Y H, Bodmer Danielle, Hoenselaar Eveline, Hendriks-Cornelissen Sandra J B, Tsui Wai Yin, Kong Chi Kwan, Brunner Han G, van Kessel Ad Geurts, Yuen Siu Tsan, van Krieken J Han J M, Leung Suet Yi, Hoogerbrugge Nicoline

机构信息

Department of Human Genetics 849, Radboud University Nijmegen Medical Centre, Nijmegen, The Netherlands.

出版信息

Nat Genet. 2009 Jan;41(1):112-7. doi: 10.1038/ng.283. Epub 2008 Dec 21.

DOI:10.1038/ng.283
PMID:19098912
Abstract

Lynch syndrome patients are susceptible to colorectal and endometrial cancers owing to inactivating germline mutations in mismatch repair genes, including MSH2 (ref. 1). Here we describe patients from Dutch and Chinese families with MSH2-deficient tumors carrying heterozygous germline deletions of the last exons of TACSTD1, a gene directly upstream of MSH2 encoding Ep-CAM. Due to these deletions, transcription of TACSTD1 extends into MSH2. The MSH2 promoter in cis with the deletion is methylated in Ep-CAM positive but not in Ep-CAM negative normal tissues, thus revealing a correlation between activity of the mutated TACSTD1 allele and epigenetic inactivation of the corresponding MSH2 allele. Gene silencing by transcriptional read-through of a neighboring gene in either sense, as demonstrated here, or antisense direction, could represent a general mutational mechanism. Depending on the expression pattern of the neighboring gene that lacks its normal polyadenylation signal, this may cause either generalized or mosaic patterns of epigenetic inactivation.

摘要

林奇综合征患者由于错配修复基因(包括MSH2,参考文献1)的种系失活突变,易患结直肠癌和子宫内膜癌。在此,我们描述了来自荷兰和中国家庭的患者,他们患有MSH2缺陷肿瘤,携带TACSTD1最后外显子的杂合种系缺失,TACSTD1是MSH2上游直接编码Ep-CAM的基因。由于这些缺失,TACSTD1的转录延伸到MSH2。在Ep-CAM阳性而非Ep-CAM阴性的正常组织中,与缺失顺式的MSH2启动子发生甲基化,从而揭示了突变的TACSTD1等位基因的活性与相应MSH2等位基因的表观遗传失活之间的相关性。如本文所示,通过相邻基因在正义或反义方向的转录通读导致的基因沉默,可能代表一种普遍的突变机制。根据缺乏正常多聚腺苷酸化信号的相邻基因的表达模式,这可能导致表观遗传失活的普遍或镶嵌模式。

相似文献

1
Heritable somatic methylation and inactivation of MSH2 in families with Lynch syndrome due to deletion of the 3' exons of TACSTD1.由于TACSTD1基因3'外显子缺失导致的林奇综合征家族中MSH2基因的可遗传体细胞甲基化和失活。
Nat Genet. 2009 Jan;41(1):112-7. doi: 10.1038/ng.283. Epub 2008 Dec 21.
2
Deletions removing the last exon of TACSTD1 constitute a distinct class of mutations predisposing to Lynch syndrome.缺失TACSTD1基因的最后一个外显子构成了一类导致林奇综合征的独特突变类型。
Hum Mutat. 2009 Feb;30(2):197-203. doi: 10.1002/humu.20942.
3
Frequency of deletions of EPCAM (TACSTD1) in MSH2-associated Lynch syndrome cases.EPCAM(TACSTD1)缺失在 MSH2 相关林奇综合征病例中的频率。
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Identification of a Japanese Lynch syndrome patient with large deletion in the 3' region of the EPCAM gene.一名EPCAM基因3'区域存在大片段缺失的日本林奇综合征患者的鉴定。
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Lynch syndrome-associated extracolonic tumors are rare in two extended families with the same EPCAM deletion.林奇综合征相关的结外肿瘤在两个具有相同 EPCAM 缺失的扩展家族中罕见。
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Usefulness of epithelial cell adhesion molecule expression in the algorithmic approach to Lynch syndrome identification.上皮细胞黏附分子表达在林奇综合征识别算法中的作用。
Hum Pathol. 2013 Mar;44(3):412-6. doi: 10.1016/j.humpath.2012.06.006. Epub 2012 Sep 29.

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Genome-wide DNA methylation profiles of colorectal tumors in Lynch syndrome and familial adenomatous polyposis.林奇综合征和家族性腺瘤性息肉病中结直肠肿瘤的全基因组DNA甲基化谱。
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本文引用的文献

1
Identification of EpCAM as the gene for congenital tufting enteropathy.鉴定EpCAM为先天性簇状肠病的致病基因。
Gastroenterology. 2008 Aug;135(2):429-37. doi: 10.1053/j.gastro.2008.05.036. Epub 2008 May 15.
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Further evidence for heritability of an epimutation in one of 12 cases with MLH1 promoter methylation in blood cells clinically displaying HNPCC.在临床上表现为遗传性非息肉病性结直肠癌(HNPCC)的12例血细胞中MLH1启动子甲基化的病例中,有1例存在表观遗传突变遗传性的进一步证据。
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Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA.
一种综合临床、种系、体细胞和计算机模拟方法,用于评估在两个无关的林奇综合征家族中鉴定出的一种新型PMS2基因变异。
Cancers (Basel). 2025 Jul 11;17(14):2308. doi: 10.3390/cancers17142308.
4
MLH1 c.27G>A (p.Arg9=) is a synonymous likely/pathogenic variant underlying variably mosaic constitutional MLH1 methylation in Lynch syndrome.MLH1基因c.27G>A(p.Arg9=)是林奇综合征中可变镶嵌性体质性MLH1甲基化潜在的同义可能/致病性变异。
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Therapeutic targeting of mismatch repair-deficient cancers.错配修复缺陷型癌症的治疗靶向作用
Nat Rev Clin Oncol. 2025 Jul 10. doi: 10.1038/s41571-025-01054-6.
6
A Pathogenic Variant in Familial Lynch Syndrome-Associated Colon Cancer: Insights into Genetic Basis and Tumor Microenvironment Characteristics.家族性林奇综合征相关结肠癌中的一种致病变异:对遗传基础和肿瘤微环境特征的见解
Phenomics. 2025 Mar 26;5(2):183-191. doi: 10.1007/s43657-024-00202-9. eCollection 2025 Apr.
7
BRCA1 promoter hypermethylation is not associated with germline variants in Polish breast cancer patients.在波兰乳腺癌患者中,BRCA1启动子高甲基化与种系变异无关。
Hered Cancer Clin Pract. 2025 Jun 10;23(1):18. doi: 10.1186/s13053-025-00317-8.
8
Epigenetic Therapies in Melanoma-Targeting DNA Methylation and Histone Modification.黑色素瘤中的表观遗传疗法——靶向DNA甲基化和组蛋白修饰
Biomedicines. 2025 May 13;13(5):1188. doi: 10.3390/biomedicines13051188.
9
A series of reviews in familial cancer: genetic cancer risk in context variants of uncertain significance in MMR genes: which procedures should be followed?一系列关于家族性癌症的综述:错配修复(MMR)基因中意义不确定的背景变异的遗传性癌症风险:应遵循哪些程序?
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10
Hereditary Colorectal Cancer: From Diagnosis to Surgical Options.遗传性结直肠癌:从诊断到手术选择
Clin Colon Rectal Surg. 2024 Jul 3;38(3):179-190. doi: 10.1055/s-0044-1787884. eCollection 2025 May.
肿瘤抑制基因p15通过其反义RNA发生表观遗传沉默。
Nature. 2008 Jan 10;451(7175):202-6. doi: 10.1038/nature06468.
4
MS-MLPA: an attractive alternative laboratory assay for robust, reliable, and semiquantitative detection of MGMT promoter hypermethylation in gliomas.多重连接探针扩增技术(MS-MLPA):一种用于可靠、稳健且半定量检测胶质瘤中MGMT启动子高甲基化的有吸引力的替代实验室检测方法。
Lab Invest. 2007 Oct;87(10):1055-65. doi: 10.1038/labinvest.3700664. Epub 2007 Aug 13.
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Patients with an unexplained microsatellite instable tumour have a low risk of familial cancer.患有不明原因微卫星不稳定肿瘤的患者患家族性癌症的风险较低。
Br J Cancer. 2007 May 21;96(10):1605-12. doi: 10.1038/sj.bjc.6603754. Epub 2007 Apr 24.
6
MLH1 germline epimutations in selected patients with early-onset non-polyposis colorectal cancer.早期发病的非息肉病性结直肠癌特定患者中的MLH1种系表观突变
Clin Genet. 2007 Mar;71(3):232-7. doi: 10.1111/j.1399-0004.2007.00751.x.
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Inheritance of a cancer-associated MLH1 germ-line epimutation.一种与癌症相关的MLH1种系表观突变的遗传
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8
Evidence for heritable predisposition to epigenetic silencing of MLH1.MLH1基因表观遗传沉默存在遗传易感性的证据。
Int J Cancer. 2007 Apr 15;120(8):1684-8. doi: 10.1002/ijc.22406.
9
Heritable germline epimutation of MSH2 in a family with hereditary nonpolyposis colorectal cancer.遗传性非息肉病性结直肠癌家族中MSH2的可遗传种系表观突变。
Nat Genet. 2006 Oct;38(10):1178-83. doi: 10.1038/ng1866. Epub 2006 Sep 3.
10
MLH1 germline epimutations as a factor in hereditary nonpolyposis colorectal cancer.MLH1种系表观突变作为遗传性非息肉病性结直肠癌的一个因素
Gastroenterology. 2005 Nov;129(5):1392-9. doi: 10.1053/j.gastro.2005.09.003.