Yi Rui, Pasolli H Amalia, Landthaler Markus, Hafner Markus, Ojo Tolulope, Sheridan Robert, Sander Chris, O'Carroll Donal, Stoffel Markus, Tuschl Thomas, Fuchs Elaine
Howard Hughes Medical Institute, Laboratory of Mammalian Cell Biology and Development, and Laboratory of RNA Molecular Biology, The Rockefeller University, New York, NY 10065, USA.
Proc Natl Acad Sci U S A. 2009 Jan 13;106(2):498-502. doi: 10.1073/pnas.0810766105. Epub 2008 Dec 29.
MicroRNAs play important roles in animal development. Numerous conditional knockout (cKO) studies of Dicer have been performed to interrogate the functions of microRNA during mammalian development. However, because Dicer was recently implicated in the biogenesis of endogenous siRNAs in mammals, it raises the question whether the Dicer cKO defects can be attributable to the loss of microRNAs. Previously, we and others conditionally targeted Dicer and identified its critical roles in embryonic skin morphogenesis. Here, we focus explicitly on microRNAs by taking a parallel strategy with Dgcr8, encoding an essential component of the microprocessor complex that is exclusively required for microRNA biogenesis. With this comparative analysis, we show definitively that the Dicer- and Dgcr8-null skin defects are both striking and indistinguishable. By deep sequencing analysis of microRNA depletion in both Dicer- and Dgcr8-null skin, we demonstrate that most abundantly expressed skin microRNAs are dependent on both Dicer and DGCR8. Our results underscore a specific importance of microRNAs in controlling mammalian skin development.
微小RNA在动物发育过程中发挥着重要作用。为了探究微小RNA在哺乳动物发育过程中的功能,人们进行了大量关于Dicer的条件性敲除(cKO)研究。然而,由于最近发现Dicer参与哺乳动物内源性小干扰RNA(siRNA)的生物合成,这就引发了一个问题,即Dicer cKO缺陷是否可归因于微小RNA的缺失。此前,我们和其他研究团队对Dicer进行了条件性靶向,并确定了其在胚胎皮肤形态发生中的关键作用。在这里,我们通过与Dgcr8采取平行策略,明确聚焦于微小RNA,Dgcr8编码微小RNA加工复合体的一个必需组分,该复合体是微小RNA生物合成所特有的。通过这种比较分析,我们明确表明,Dicer和Dgcr8基因敲除导致的皮肤缺陷既显著又难以区分。通过对Dicer和Dgcr8基因敲除皮肤中微小RNA缺失的深度测序分析,我们证明,大多数高表达的皮肤微小RNA都依赖于Dicer和DGCR8。我们的结果强调了微小RNA在控制哺乳动物皮肤发育中的特殊重要性。