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人类CD34+造血干细胞/祖细胞的遗传网络分析。

Genetic network analysis of human CD34+ hematopoietic stem/precursor cells.

作者信息

Chang Shing-Jyh, Huang Tse-Sung, Wang Kung-Liahng, Wang Tao-Yeuan, Yang Yuh-Cheng, Chang Margaret Dah-Tsyr, Wu Yu-Hsuan, Wang Hsei-Wei

机构信息

Department of Obstetrics and Gynecology, Mackay Memorial Hospital, and National Tsing Hua University, HsinChu, Taiwan.

出版信息

Taiwan J Obstet Gynecol. 2008 Dec;47(4):422-30. doi: 10.1016/S1028-4559(09)60010-3.

DOI:10.1016/S1028-4559(09)60010-3
PMID:19126509
Abstract

OBJECTIVE

Somatic CD34+ hematopoietic stem/precursor cells (HSPCs) give rise to hematopoietic cells and endothelial cells and have been used in clinical applications. Understanding the genes responsible for stemness and how they interact with each other will help us to manipulate these cells more efficiently in the future.

MATERIALS AND METHODS

We performed microarray analysis on human CD34+ HSPCs and on two different progeny cell types, i.e. microvascular endothelial cells and peripheral blood mononuclear cells. Systems biology and advanced bioinformatics tools were used to help clarify the genetic networks associated with these stem cell genes.

RESULTS

We identified CD34+ HSPC genes and found that they were involved in critical biologic processes such as cell cycle regulation, chromosome organization, and DNA repair. We also identified a novel precursor gene cluster on chromosome 19p13.3. Analysis of HSPC-enriched genes using systems biology tools revealed a complex genetic network functioning in CD34+ cells, in which several genes acted as hubs to maintain the stability (such as GATA1) or connectivity (such as hepatic growth factor) of the whole network.

CONCLUSION

This study provides the foundation for a more detailed understanding of CD34+ HSPCs.

摘要

目的

体细胞CD34+造血干/祖细胞(HSPCs)可分化为造血细胞和内皮细胞,并已应用于临床。了解负责干性的基因及其相互作用方式将有助于我们未来更有效地操控这些细胞。

材料与方法

我们对人CD34+ HSPCs以及两种不同的子代细胞类型,即微血管内皮细胞和外周血单个核细胞进行了微阵列分析。运用系统生物学和先进的生物信息学工具来帮助阐明与这些干细胞基因相关的遗传网络。

结果

我们鉴定出了CD34+ HSPC基因,并发现它们参与了诸如细胞周期调控、染色体组织和DNA修复等关键生物学过程。我们还在19号染色体p13.3上鉴定出了一个新的前体基因簇。使用系统生物学工具对富含HSPC的基因进行分析,揭示了一个在CD34+细胞中发挥作用的复杂遗传网络,其中几个基因充当枢纽以维持整个网络的稳定性(如GATA1)或连通性(如肝细胞生长因子)。

结论

本研究为更详细地了解CD34+ HSPCs奠定了基础。

相似文献

1
Genetic network analysis of human CD34+ hematopoietic stem/precursor cells.人类CD34+造血干细胞/祖细胞的遗传网络分析。
Taiwan J Obstet Gynecol. 2008 Dec;47(4):422-30. doi: 10.1016/S1028-4559(09)60010-3.
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Unique biological properties and application potentials of CD34+ CD38- stem cells from various sources.不同来源的 CD34+ CD38- 干细胞的独特生物学特性和应用潜力。
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Functional network reconstruction reveals somatic stemness genetic maps and dedifferentiation-like transcriptome reprogramming induced by GATA2.功能网络重建揭示了体细胞干性遗传图谱以及由GATA2诱导的去分化样转录组重编程。
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Microarray and serial analysis of gene expression analyses identify known and novel transcripts overexpressed in hematopoietic stem cells.基因芯片和基因表达系列分析鉴定出在造血干细胞中过表达的已知和新转录本。
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Mobilization of CD34/CXCR4+, CD34/CD117+, c-met+ stem cells, and mononuclear cells expressing early cardiac, muscle, and endothelial markers into peripheral blood in patients with acute myocardial infarction.急性心肌梗死患者外周血中CD34/CXCR4+、CD34/CD117+、c-met+干细胞以及表达早期心脏、肌肉和内皮标志物的单核细胞的动员。
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Molecular profiling of CD34+ cells in idiopathic myelofibrosis identifies a set of disease-associated genes and reveals the clinical significance of Wilms' tumor gene 1 (WT1).原发性骨髓纤维化中CD34+细胞的分子谱分析鉴定出一组疾病相关基因,并揭示了威尔姆斯肿瘤基因1(WT1)的临床意义。
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The kinetic status of hematopoietic stem cell subpopulations underlies a differential expression of genes involved in self-renewal, commitment, and engraftment.造血干细胞亚群的动力学状态是参与自我更新、定向分化和植入的基因差异表达的基础。
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