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新属种——沙门金泥杆菌,从黄海潮滩分离得到。

Lutimaribacter saemankumensis gen. nov., sp. nov., isolated from a tidal flat of the Yellow Sea.

作者信息

Yoon Jung-Hoon, Kang So-Jung, Lee Jung-Sook, Oh Tae-Kwang

机构信息

Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2009 Jan;59(Pt 1):48-52. doi: 10.1099/ijs.0.000109-0.

Abstract

A Gram-negative, non-motile, rod-shaped bacterial strain, designated SMK-117T, belonging to the Alphaproteobacteria, was isolated from a tidal flat of the Yellow Sea, Korea, and was subjected to a polyphasic taxonomic study. Strain SMK-117T grew optimally at pH 7.0-8.0 and 30 degrees C in the presence of 2 % (w/v) NaCl. Neighbour-joining and maximum-likelihood phylogenetic trees based on 16S rRNA gene sequences showed that strain SMK-117T clustered with Maritimibacter alkaliphilus HTCC2654T, with which it exhibited a sequence similarity of 95.3 %. Strain SMK-117T contained Q-10 as the predominant ubiquinone and C(18 : 1)omega7c and 11-methyl C(18 : 1)omega7c as the major fatty acids. The major polar lipids were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine, an unidentified aminolipid and two unidentified phospholipids. The DNA G+C content was 63.5 mol%. Strain SMK-117T was differentiated from members of the genera Maritimibacter and Oceanicola on the basis of differences in the fatty acid and polar lipid profiles. The phenotypic, chemotaxonomic and phylogenetic data indicated that strain SMK-117T represents a novel genus and species, for which the name Lutimaribacter saemankumensis gen. nov., sp. nov. is proposed. The type strain of Lutimaribacter saemankumensis is SMK-117T (=KCTC 22244T =CCUG 55760T).

摘要

从韩国黄海潮间带分离出一株革兰氏阴性、无运动性、杆状的细菌菌株,命名为SMK-117T,属于α-变形菌纲,并对其进行了多相分类研究。菌株SMK-117T在pH 7.0 - 8.0和30℃、2%(w/v)NaCl条件下生长最佳。基于16S rRNA基因序列构建的邻接法和最大似然法系统发育树表明,菌株SMK-117T与嗜碱海洋杆菌HTCC2654T聚类在一起,序列相似性为95.3%。菌株SMK-117T以Q-10作为主要泛醌,以C(18 : 1)ω7c和11-甲基C(18 : 1)ω7c作为主要脂肪酸。主要极性脂为磷脂酰胆碱、磷脂酰甘油、磷脂酰乙醇胺、一种未鉴定的氨基脂和两种未鉴定的磷脂。DNA G+C含量为63.5 mol%。基于脂肪酸和极性脂谱的差异,菌株SMK-117T与海洋杆菌属和海栖菌属的成员区分开来。表型、化学分类和系统发育数据表明,菌株SMK-117T代表一个新的属和种,为此提出新属名黄海海栖杆菌属(Lutimaribacter),新种名黄海海栖杆菌(Lutimaribacter saemankumensis)。黄海海栖杆菌的模式菌株为SMK-117T(=KCTC 22244T =CCUG 55760T)。

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