Georgakopoulou Sofia, Möller Dorothee, Sachs Nadine, Herrmann Harald, Aebi Ueli
M. E. Müller Institute for Structural Biology, University of Basel, Switzerland.
J Mol Biol. 2009 Feb 20;386(2):544-53. doi: 10.1016/j.jmb.2008.12.053. Epub 2008 Dec 30.
In vitro assembly of vimentin intermediate filaments (IFs) proceeds from soluble, reconstituted tetrameric complexes to mature filaments in three distinct stages: (1) within the first seconds after initiation of assembly, tetramers laterally associate into unit-length filaments (ULFs), on average 17 nm wide; (2) for the next few minutes, ULFs grow by longitudinal annealing into short, immature filaments; (3) almost concomitant with elongation, these immature filaments begin to radially compact, yielding approximately 11-nm-wide IFs at around 15 min. The near-UV CD signal of soluble tetramers exhibits two main peaks at 285 and 278 nm, which do not change during ULF formation. In contrast, the CD signal of mature IFs exhibits two major changes: (1) the 278-nm band, denoting the transition of the tyrosines from the ground state to the first vibrational mode of the excited state, is lost; (2) a red-shifted band appears at 291 nm, indicating the emergence of a new electronic species. These changes take place independently and at different time scales. The 278-nm signal disappears within the first minute of assembly, compatible with increased rigidity of the tyrosines during elongation of the ULFs. The rise of the 291-nm band has a lifetime of approximately 13 min and denotes the generation of phenolates by deprotonation of the tyrosines' hydroxyl group after they relocalize into a negatively charged environment. The appearance of such tyrosine-binding "pockets" in the assembling filaments highlights an essential part of the molecular rearrangements characterizing the later stages of the assembly process, including the radial compaction.
波形蛋白中间丝(IFs)的体外组装过程从可溶性的、重构的四聚体复合物开始,历经三个不同阶段形成成熟的丝:(1)在组装开始后的最初几秒内,四聚体横向缔合形成单位长度丝(ULFs),平均宽度为17纳米;(2)在接下来的几分钟内,ULFs通过纵向退火生长为短的、不成熟的丝;(3)几乎与伸长同时发生,这些不成熟的丝开始径向压缩,在大约15分钟时产生宽度约为11纳米的IFs。可溶性四聚体的近紫外圆二色(CD)信号在285和278纳米处呈现两个主要峰,在ULF形成过程中这些峰不会改变。相比之下,成熟IFs的CD信号呈现两个主要变化:(1)表示酪氨酸从基态跃迁到激发态的第一振动模式的278纳米波段消失;(2)在291纳米处出现一个红移波段,表明出现了一种新的电子物种。这些变化独立发生且时间尺度不同。278纳米信号在组装的第一分钟内消失,这与ULF伸长过程中酪氨酸刚性增加相一致。291纳米波段的上升寿命约为13分钟,表示酪氨酸羟基重新定位到带负电荷的环境后通过去质子化产生酚盐。组装丝中这种酪氨酸结合“口袋”的出现突出了分子重排的一个重要部分,该重排是组装过程后期(包括径向压缩)的特征。