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聚苯乙烯纳米球对蛋白质结晶的贡献。

The contribution of polystyrene nanospheres towards the crystallization of proteins.

作者信息

Kallio Johanna M, Hakulinen Nina, Kallio Juha P, Niemi Merja H, Kärkkäinen Susanna, Rouvinen Juha

机构信息

Department of Chemistry, University of Joensuu, Joensuu, Finland.

出版信息

PLoS One. 2009;4(1):e4198. doi: 10.1371/journal.pone.0004198. Epub 2009 Jan 15.

Abstract

BACKGROUND

Protein crystallization is a slow process of trial and error and limits the amount of solved protein structures. Search of a universal heterogeneous nucleant is an effort to facilitate crystallizability of proteins.

METHODOLOGY

The effect of polystyrene nanospheres on protein crystallization were tested with three commercial proteins: lysozyme, xylanase, xylose isomerase, and with five research target proteins: hydrophobins HFBI and HFBII, laccase, sarcosine dimethylglycine N-methyltransferase (SDMT), and anti-testosterone Fab fragment 5F2. The use of nanospheres both in screening and as an additive for known crystallization conditions was studied. In screening, the addition of an aqueous solution of nanosphere to the crystallization drop had a significant positive effect on crystallization success in comparison to the control screen. As an additive in hydrophobin crystallization, the nanospheres altered the crystal packing, most likely due to the amphiphilic nature of hydrophobins. In the case of laccase, nanospheres could be used as an alternative for streak-seeding, which insofar had remained the only technique to produce high-diffracting crystals. With methyltransferase SDMT the nanospheres, used also as an additive, produced fewer, larger crystals in less time. Nanospheres, combined with the streak-seeding method, produced single 5F2 Fab crystals in shorter equilibration times.

CONCLUSIONS

All in all, the use of nanospheres in protein crystallization proved to be beneficial, both when screening new crystallization conditions to promote nucleation and when used as an additive to produce better quality crystals, faster. The polystyrene nanospheres are easy to use, commercially available and close to being inert, as even with amphiphilic proteins only the crystal packing is altered and the nanospheres do not interfere with the structure and function of the protein.

摘要

背景

蛋白质结晶是一个反复试验的缓慢过程,限制了已解析蛋白质结构的数量。寻找通用的异质成核剂有助于提高蛋白质的结晶能力。

方法

用三种商业蛋白质(溶菌酶、木聚糖酶、木糖异构酶)以及五种研究目标蛋白质(疏水蛋白HFBI和HFBII、漆酶、肌氨酸二甲基甘氨酸N-甲基转移酶(SDMT)和抗睾酮Fab片段5F2)测试了聚苯乙烯纳米球对蛋白质结晶的影响。研究了纳米球在筛选新结晶条件以及作为已知结晶条件添加剂时的使用情况。在筛选过程中,与对照筛选相比,向结晶滴中添加纳米球水溶液对结晶成功率有显著的积极影响。作为疏水蛋白结晶的添加剂,纳米球改变了晶体堆积,这很可能是由于疏水蛋白的两亲性质。对于漆酶,纳米球可作为划线接种的替代方法,在此之前划线接种一直是产生高衍射晶体的唯一技术。对于甲基转移酶SDMT,纳米球作为添加剂使用时,能在更短时间内产生数量更少、尺寸更大的晶体。纳米球与划线接种方法相结合,能在更短的平衡时间内产生单颗5F2 Fab晶体。

结论

总而言之,在蛋白质结晶中使用纳米球已证明是有益的,无论是在筛选新的结晶条件以促进成核时,还是作为添加剂以更快地产生质量更好的晶体时。聚苯乙烯纳米球易于使用、可商购且几乎呈惰性,因为即使对于两亲性蛋白质,也只是改变了晶体堆积,纳米球不会干扰蛋白质的结构和功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4139/2615210/f37e08f717fb/pone.0004198.g001.jpg

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