Zhang Chen-Yan, Mazumdar Mausumi, Zhu Dao-Wei, Yin Da-Chuan, Lin Sheng-Xiang
Laboratory of Molecular Endocrinology and Oncology, Centre Hospitalier de Université Laval Research Center (CHUL, CHUQ) and Laval University, Québec, G1V 4G2, Canada.
Protein Pept Lett. 2011 Oct;18(10):991-6. doi: 10.2174/0929866511107010991.
The nucleation zone has to be reached for any crystal to grow, and the search for crystallization conditions of new proteins is a trial and error process. Here a convenient screening strategy is studied in detail that varies the volume ratio of protein sample to the reservoir solution in the drop to initiate crystallization that is named "composition modification". It is applied after the first screen and has been studied with twelve proteins. Statistical analysis shows a significant improvement in screening using this strategy. The average improvement of "hits" at different temperatures is between 32 and 42%, for examples, 41.8% ± 14.0% and 35.7% ± 12.4% (± standard deviation) at 288 K and 300 K, respectively. Remarkably, some new crystals were found by composition modification which increased the probability of reaching the nucleation zone to initiate crystallization. This was confirmed by a phase diagram study. It is also demonstrated that composition modification can further increase crystallisation success significantly (1.3 times) after the improvement of "hits" by temperature screening. The trajectories of different composition modifications during vapour diffusion were plotted, further demonstrating that protein crystallizability can be increased by hitting more parts of the nucleation zone. It was also found to facilitate the finding of initial crystals for proteins of low solubility. These proteins gradually become more concentrated during the vapour diffusion process starting from a larger protein solution ratio in the initial mixture.
任何晶体生长都必须达到成核区,而寻找新蛋白质的结晶条件是一个反复试验的过程。本文详细研究了一种便捷的筛选策略,即改变液滴中蛋白质样品与储液的体积比来引发结晶,这种方法被称为“组成修饰”。它在首次筛选后应用,已对12种蛋白质进行了研究。统计分析表明,使用该策略进行筛选有显著改进。例如,在不同温度下“命中”的平均改进率在32%至42%之间,在288K和300K时分别为41.8%±14.0%和35.7%±12.4%(±标准差)。值得注意的是,通过组成修饰发现了一些新晶体,这增加了到达成核区引发结晶的概率。这一点通过相图研究得到了证实。研究还表明,在通过温度筛选提高“命中”率后,组成修饰可进一步显著提高结晶成功率(1.3倍)。绘制了蒸汽扩散过程中不同组成修饰的轨迹,进一步证明通过触及成核区的更多部分可以提高蛋白质的结晶能力。还发现它有助于找到低溶解度蛋白质的初始晶体。从初始混合物中较大的蛋白质溶液比例开始,这些蛋白质在蒸汽扩散过程中逐渐变得更加浓缩。