• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

使用氚平面显像法模拟蛋白质三维结构。

Modelling protein three-dimensional structure using tritium planigraphy.

作者信息

Gedrovich A, Shishkov A, Goldanskii V, Baratova L, Grebenshchikov N, Efimov A

机构信息

N.N. Semenov Institute of Chemical Physics, Academy of Sciences, Moscow, USSR.

出版信息

Eur Biophys J. 1991;19(6):283-6. doi: 10.1007/BF00183316.

DOI:10.1007/BF00183316
PMID:1915152
Abstract

We propose the use of data on the topography of the label-accessible surface of a protein molecule obtained by the method of tritium planigraphy as a criterion for choosing the optimal intermediate arrangements of alpha-helices in globular proteins so as to model their three-dimensional structures. This approach has been used for modelling the three-dimensional structure of parvalbumin III from pike. The proposed model has been compared with high-resolution X-ray structural data for a related protein, paryvalbumin from carp. The possibilities and limitations of this approach are discussed.

摘要

我们建议将通过氚平面造影法获得的蛋白质分子标记可及表面的拓扑数据用作选择球状蛋白质中α-螺旋最佳中间排列的标准,以便对其三维结构进行建模。这种方法已用于对梭子鱼的小白蛋白III的三维结构进行建模。所提出的模型已与相关蛋白质——鲤鱼的小白蛋白的高分辨率X射线结构数据进行了比较。讨论了这种方法的可能性和局限性。

相似文献

1
Modelling protein three-dimensional structure using tritium planigraphy.使用氚平面显像法模拟蛋白质三维结构。
Eur Biophys J. 1991;19(6):283-6. doi: 10.1007/BF00183316.
2
[Quantitative determination of the accessible surface of globular proteins by tritium planigraphy].
Mol Biol (Mosk). 1993 Mar-Apr;27(2):309-15.
3
Crystal structure of the unique parvalbumin component from muscle of the leopard shark (Triakis semifasciata). The first X-ray study of an alpha-parvalbumin.豹纹鲨(半带皱唇鲨)肌肉中独特的小清蛋白成分的晶体结构。对α-小清蛋白的首次X射线研究。
J Mol Biol. 1992 Feb 5;223(3):705-20. doi: 10.1016/0022-2836(92)90985-s.
4
Tritium planigraphy: from the accessible surface to the spatial structure of a protein.氚平面成像:从可及表面到蛋白质的空间结构
Proc Natl Acad Sci U S A. 1998 Mar 17;95(6):2790-4. doi: 10.1073/pnas.95.6.2790.
5
[Modeling of protein spatial structure using tritium planigraphy].
Biofizika. 2011 Nov-Dec;56(6):1024-37.
6
[Study of the spatial structure of globular proteins by tritium planigraphy. Short peptides as a model of a fully extended polypeptide chain].
Mol Biol (Mosk). 1992 May-Jun;26(3):558-64.
7
The organization of potato virus X coat proteins in virus particles studied by tritium planigraphy and model building.
Virology. 1992 May;188(1):175-80. doi: 10.1016/0042-6822(92)90747-d.
8
Ionic interactions with parvalbumins. Crystal structure determination of pike 4.10 parvalbumin in four different ionic environments.与小清蛋白的离子相互作用。四种不同离子环境下梭子鱼4.10小清蛋白的晶体结构测定。
J Mol Biol. 1991 Aug 20;220(4):1017-39. doi: 10.1016/0022-2836(91)90369-h.
9
Towards protein tertiary fold prediction using distance and motif constraints.基于距离和基序约束的蛋白质三级结构预测方法
Protein Eng. 1991 Dec;4(8):853-70. doi: 10.1093/protein/4.8.853.
10
X-Ray crystal structure and molecular dynamics simulations of silver hake parvalbumin (Isoform B).银无须鳕小清蛋白(异构体B)的X射线晶体结构与分子动力学模拟
Protein Sci. 2000 Jan;9(1):73-82. doi: 10.1110/ps.9.1.73.

引用本文的文献

1
Tritium planigraphy: from the accessible surface to the spatial structure of a protein.氚平面成像:从可及表面到蛋白质的空间结构
Proc Natl Acad Sci U S A. 1998 Mar 17;95(6):2790-4. doi: 10.1073/pnas.95.6.2790.
2
Flavin-dependent alcohol oxidase from the yeast Pichia pinus. Spatial localization of the coenzyme FAD in the protein structure: hot-tritium bombardment and ESR experiments.来自酵母毕赤酵母的黄素依赖性乙醇氧化酶。辅酶FAD在蛋白质结构中的空间定位:热氚轰击和电子自旋共振实验。
Biochem J. 1995 Sep 1;310 ( Pt 2)(Pt 2):601-4. doi: 10.1042/bj3100601.

本文引用的文献

1
Circular dichroic analysis of protein conformation: inclusion of the beta-turns.蛋白质构象的圆二色性分析:β-转角的纳入
Anal Biochem. 1978 Nov;91(1):13-31. doi: 10.1016/0003-2697(78)90812-6.
2
[Study of the three-dimensional structure of proteins by means of tritium labeling. II. Intramolecular distribution of tritium in the N-terminal part of myoglobin and the tertiary structure of protein].用氚标记研究蛋白质的三维结构。II. 肌红蛋白N端部分氚的分子内分布及蛋白质的三级结构
Mol Biol (Mosk). 1982 May-Jun;16(3):528-34.
3
Comparative study of physiochemical properties of two pike parvalbumins by means of their intrinsic tyrosyl and phenylalanyl fluorescence.
Arch Biochem Biophys. 1983 Nov;227(1):9-20. doi: 10.1016/0003-9861(83)90343-0.
4
The interpretation of protein structures: estimation of static accessibility.蛋白质结构的解读:静态可及性的评估
J Mol Biol. 1971 Feb 14;55(3):379-400. doi: 10.1016/0022-2836(71)90324-x.
5
Environment and exposure to solvent of protein atoms. Lysozyme and insulin.蛋白质原子的环境与溶剂暴露。溶菌酶和胰岛素。
J Mol Biol. 1973 Sep 15;79(2):351-71. doi: 10.1016/0022-2836(73)90011-9.
6
Carp muscle calcium-binding protein. II. Structure determination and general description.鲤鱼肌肉钙结合蛋白。II. 结构测定与总体描述。
J Biol Chem. 1973 May 10;248(9):3313-26.
7
Conformation and immunochemistry of parvalbumin 3 from pike white muscle. Modification of the arginine residue with 1,2-cyclohexanedione.
Biochim Biophys Acta. 1973 Mar 23;303(1):90-104. doi: 10.1016/0005-2795(73)90151-7.
8
Algorithms for prediction of alpha-helical and beta-structural regions in globular proteins.预测球状蛋白质中α螺旋和β结构区域的算法。
J Mol Biol. 1974 Oct 5;88(4):873-94. doi: 10.1016/0022-2836(74)90405-7.
9
The relation between the divergence of sequence and structure in proteins.蛋白质中序列与结构的差异关系。
EMBO J. 1986 Apr;5(4):823-6. doi: 10.1002/j.1460-2075.1986.tb04288.x.
10
Are there proteins between the ribosomal subunits? Hot tritium bombardment experiments.核糖体亚基之间存在蛋白质吗?热氚轰击实验。
FEBS Lett. 1986 Mar 3;197(1-2):229-33. doi: 10.1016/0014-5793(86)80332-5.