Lagnel Jacques, Tsigenopoulos Costas S, Iliopoulos Ioannis
Institute of Marine Biology and Genetics, Hellenic Centre for Marine Research, Heraklion 71003, Crete, Greece.
Bioinformatics. 2009 Mar 15;25(6):824-6. doi: 10.1093/bioinformatics/btp067. Epub 2009 Jan 29.
NOBLAST (New Options for BLAST) is an open source program that provides a new user-friendly tabular output format for various NCBI BLAST programs (Blastn, Blastp, Blastx, Tblastn, Tblastx, Mega BLAST and Psi BLAST) without any use of a parser and provides E-value correction in case of use of segmented BLAST database. JAMBLAST using the NOBLAST output allows the user to manage, view and filter the BLAST hits using a number of selection criteria.
A distribution package of NOBLAST and JAMBLAST including detailed installation procedure is freely available from http://sourceforge.net/projects/JAMBLAST/ and http://sourceforge.net/projects/NOBLAST.
Supplementary data are available at Bioinformatics online.
NOBLAST(BLAST的新选项)是一个开源程序,它为各种NCBI BLAST程序(Blastn、Blastp、Blastx、Tblastn、Tblastx、Mega BLAST和Psi BLAST)提供了一种新的用户友好的表格输出格式,无需使用任何解析器,并且在使用分段BLAST数据库时提供E值校正。使用NOBLAST输出的JAMBLAST允许用户使用多种选择标准来管理、查看和筛选BLAST命中结果。
补充数据可在《生物信息学》在线获取。