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枯草芽孢杆菌代谢网络的碳分解代谢物调控

Carbon catabolite control of the metabolic network in Bacillus subtilis.

作者信息

Fujita Yasutaro

机构信息

Department of Biotechnology, Faculty of Life Science and Biotechnology, Fukuyama University, Hiroshima, Japan.

出版信息

Biosci Biotechnol Biochem. 2009 Feb;73(2):245-59. doi: 10.1271/bbb.80479. Epub 2009 Feb 7.

Abstract

The histidine-containing protein (HPr) is the energy coupling protein of the phosphoenolpyruvate-dependent carbohydrate:phosphotransferase system (PTS), which catalyzes the transport of carbohydrates in bacteria. In Bacillus subtilis and close relatives, global regulation of carbon catabolite control occurs on the binding of the complex of CcpA (catabolite control protein A) and P-Ser-HPr (seryl-phosphorylated form of HPr) to the catabolite responsive elements (cre) of the target operons, the constituent genes of which are roughly estimated to number 300. The complex of CcpA and P-Ser-HPr triggers the expression of several genes involved in the formation of acetate and acetoin, major extracellular products of B. subtilis grown on glucose. It also triggers the expression of an anabolic operon (ilv-leu) involved in the biosynthesis of branched-chain amino acids, which subsequently leads to cell propagation. On the other hand, this complex represses many genes and operons, which include an entrance gene for the TCA cycle (citZ), several transporter genes for TCA cycle-intermediates, some respiration genes, and many catabolic and anabolic genes involved in carbon, nitrogen, and phosphate metabolism, as well as for certain extracellular enzymes and secondary metabolites. Furthermore, these bacteria have CcpA-independent catabolite regulation systems, each of which involves a transcriptional repressor of CggR or CcpN. CggR and CcpN are derepressed under glycolytic and gluconeogenic growth conditions, and enhance glycolysis and gluconeogenesis respectively. Another CcpA-independent catabolite repression system involves P-His-HPr (histidyl-phosphorylated form of HPr). P-His-HPr phosphorylates and activates glycerol kinase, whose product is necessary for antitermination of the glycerol utilization operon through GlpP, the antiterminators (LicT and SacT, Y) of several operons for the utilization of less-preferred PTS-sugars, and some transcriptional activators such as LevR for the levan utilization operon. This phosphorylation is reduced due to the decreased level of P-His-HPr during active transport of a preferred PTS-carbohydrate such as glucose, resulting in catabolite repression of the target operons.Thus CcpA-dependent and independent networks for carbon metabolism play a major role in the coordinate regulation of catabolism and anabolism to ensure optimum cell propagation in the presence and the absence of a preferred PTS-carbohydrate.

摘要

含组氨酸蛋白(HPr)是磷酸烯醇丙酮酸依赖性碳水化合物:磷酸转移酶系统(PTS)的能量偶联蛋白,该系统催化细菌中碳水化合物的运输。在枯草芽孢杆菌及其近缘菌中,碳分解代谢物控制的全局调节发生在碳分解代谢物控制蛋白A(CcpA)与P-丝氨酸-HPr(HPr的丝氨酰磷酸化形式)的复合物与靶操纵子的碳分解代谢物应答元件(cre)结合时,其组成基因估计约有300个。CcpA与P-丝氨酸-HPr的复合物触发了几个与乙酸盐和3-羟基丁酮形成相关基因的表达,乙酸盐和3-羟基丁酮是枯草芽孢杆菌在葡萄糖上生长时的主要胞外产物。它还触发了一个参与支链氨基酸生物合成的合成代谢操纵子(ilv-leu)的表达,随后导致细胞增殖。另一方面,这种复合物抑制许多基因和操纵子,包括三羧酸循环的一个入口基因(citZ)、几个三羧酸循环中间产物的转运基因、一些呼吸基因以及许多参与碳、氮和磷代谢的分解代谢和合成代谢基因,以及某些胞外酶和次级代谢产物。此外,这些细菌具有不依赖CcpA的碳分解代谢调节系统,每个系统都涉及CggR或CcpN转录阻遏物。CggR和CcpN在糖酵解和糖异生生长条件下被去阻遏,分别增强糖酵解和糖异生。另一个不依赖CcpA的碳分解代谢物阻遏系统涉及P-组氨酸-HPr(HPr的组氨酰磷酸化形式)。P-组氨酸-HPr磷酸化并激活甘油激酶,其产物对于通过GlpP实现甘油利用操纵子的抗终止是必需的,GlpP是几个利用较不常用的PTS糖的操纵子的抗终止子(LicT和SacT、Y),以及一些转录激活因子,如用于果聚糖利用操纵子的LevR。由于在运输如葡萄糖这样的首选PTS碳水化合物的活跃过程中P-组氨酸-HPr水平降低,这种磷酸化作用减弱,导致靶操纵子的碳分解代谢物阻遏。因此,依赖CcpA和不依赖CcpA的碳代谢网络在分解代谢和合成代谢的协调调节中起主要作用,以确保在存在和不存在首选PTS碳水化合物的情况下实现最佳细胞增殖。

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