Suppr超能文献

一种用于合理设计稳定蛋白质和酶的计算方法:表面电荷-电荷相互作用的优化

A computational approach for the rational design of stable proteins and enzymes: optimization of surface charge-charge interactions.

作者信息

Schweiker Katrina L, Makhatadze George I

机构信息

Department of Biology and Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, New York, USA.

出版信息

Methods Enzymol. 2009;454:175-211. doi: 10.1016/S0076-6879(08)03807-X.

Abstract

The design of stable proteins and enzymes is not only of particular biotechnological importance, but also addresses some important fundamental questions. While there are a number of different options available for designing or engineering stable proteins, the field of computational design provides fast and universal methods for stabilizing proteins of interest. One of the successful computational design strategies focuses on stabilizing proteins through the optimization of charge-charge interactions on the protein surface. By optimizing surface interactions, it is possible to alleviate some of the challenges that accompany efforts to redesign the protein core. The rational design of surface charge-charge interactions also allows one to optimize only the interactions that are distant from binding sites or active sites, making it possible to increase stability without adversely affecting activity. The optimization of surface charge-charge interactions is discussed in detail along with the experimental evidence to demonstrate that this is a robust and universal approach to designing proteins with enhanced stability.

摘要

稳定蛋白质和酶的设计不仅具有特殊的生物技术重要性,还涉及一些重要的基础问题。虽然有多种不同的选项可用于设计或改造稳定的蛋白质,但计算设计领域提供了快速且通用的方法来稳定感兴趣的蛋白质。一种成功的计算设计策略专注于通过优化蛋白质表面的电荷 - 电荷相互作用来稳定蛋白质。通过优化表面相互作用,可以减轻重新设计蛋白质核心所带来的一些挑战。表面电荷 - 电荷相互作用的合理设计还允许仅优化远离结合位点或活性位点的相互作用,从而有可能在不负面影响活性的情况下提高稳定性。本文将详细讨论表面电荷 - 电荷相互作用的优化,并结合实验证据证明这是一种设计具有增强稳定性蛋白质的稳健且通用的方法。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验