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2
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Free R value: a novel statistical quantity for assessing the accuracy of crystal structures.自由R值:一种用于评估晶体结构准确性的新型统计量。
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The ADP-glucose binding site of the Escherichia coli glycogen synthase.大肠杆菌糖原合酶的ADP-葡萄糖结合位点。
Arch Biochem Biophys. 2006 Sep 15;453(2):188-96. doi: 10.1016/j.abb.2006.07.003. Epub 2006 Jul 31.
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Crystal structure of an archaeal glycogen synthase: insights into oligomerization and substrate binding of eukaryotic glycogen synthases.古菌糖原合酶的晶体结构:对真核生物糖原合酶寡聚化和底物结合的见解
J Biol Chem. 2006 Feb 3;281(5):2923-31. doi: 10.1074/jbc.M507394200. Epub 2005 Nov 29.
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ADP-Glucose Pyrophosphorylase: A Regulatory Enzyme for Plant Starch Synthesis.ADP - 葡萄糖焦磷酸化酶:植物淀粉合成的一种调节酶。
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大肠杆菌糖原合酶开放型和具有催化活性的闭合型的晶体结构。

The crystal structures of the open and catalytically competent closed conformation of Escherichia coli glycogen synthase.

作者信息

Sheng Fang, Jia Xiaofei, Yep Alejandra, Preiss Jack, Geiger James H

机构信息

Department of Chemistry, Michigan State University, East Lansing, MI 48824, USA.

出版信息

J Biol Chem. 2009 Jun 26;284(26):17796-807. doi: 10.1074/jbc.M809804200. Epub 2009 Feb 25.

DOI:10.1074/jbc.M809804200
PMID:19244233
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2719418/
Abstract

Escherichia coli glycogen synthase (EcGS, EC 2.4.1.21) is a retaining glycosyltransferase (GT) that transfers glucose from adenosine diphosphate glucose to a glucan chain acceptor with retention of configuration at the anomeric carbon. EcGS belongs to the GT-B structural superfamily. Here we report several EcGS x-ray structures that together shed considerable light on the structure and function of these enzymes. The structure of the wild-type enzyme bound to ADP and glucose revealed a 15.2 degrees overall domain-domain closure and provided for the first time the structure of the catalytically active, closed conformation of a glycogen synthase. The main chain carbonyl group of His-161, Arg-300, and Lys-305 are suggested by the structure to act as critical catalytic residues in the transglycosylation. Glu-377, previously thought to be catalytic is found on the alpha-face of the glucose and plays an electrostatic role in the active site and as a glucose ring locator. This is also consistent with the structure of the EcGS(E377A)-ADP-HEPPSO complex where the glucose moiety is either absent or disordered in the active site.

摘要

大肠杆菌糖原合酶(EcGS,EC 2.4.1.21)是一种保留型糖基转移酶(GT),它将来自二磷酸腺苷葡萄糖的葡萄糖转移到葡聚糖链受体上,同时在异头碳上保留构型。EcGS属于GT-B结构超家族。在此,我们报告了几个EcGS的X射线结构,这些结构共同为这些酶的结构和功能提供了相当多的信息。与ADP和葡萄糖结合的野生型酶的结构显示整体结构域间有15.2度的闭合,首次提供了糖原合酶催化活性闭合构象的结构。结构表明,His-161、Arg-300和Lys-305的主链羰基在转糖基化过程中作为关键催化残基。之前认为具有催化作用的Glu-377位于葡萄糖的α面上,在活性位点起静电作用并作为葡萄糖环定位器。这也与EcGS(E377A)-ADP-HEPPSO复合物的结构一致,在该复合物中,活性位点要么不存在葡萄糖部分,要么葡萄糖部分无序。