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嗜热栖热放线菌Rt17-B1嗜热纤维素酶的结晶及初步晶体学分析

Crystallization and preliminary crystallographic analysis of thermophilic cellulase from Fervidobacterium nodosum Rt17-B1.

作者信息

Zheng Baisong, Yang Wen, Wang Yuguo, Feng Yan, Lou Zhiyong

机构信息

Tsinghua University, Beijing, People's Republic of China.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Mar 1;65(Pt 3):219-22. doi: 10.1107/S1744309109001316. Epub 2009 Feb 12.

DOI:10.1107/S1744309109001316
PMID:19255469
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2650467/
Abstract

FnCel5A, a thermostable endoglucanase, is a member of glycohydrolase family 5 which catalyzes the hydrolysis of cellulose to glucose in the thermophilic bacterium Fervidobacterium nodosum Rt17-B1. FnCel5A is particularly interesting because of its high thermostability (T(opt) = 353 K, half-life 48 h) and its high specific activity towards carboxymethylcellulose. These properties make FnCel5A an attractive target for protein engineering to improve cellulase activity. In order to resolve the crystal structure of FnCel5A and to gain a better understanding of its biological function, recombinant FnCel5A was expressed, purified and crystallized at 291 K using NaH(2)PO(4)/KH(2)PO(4) as a precipitant. A 2.4 A resolution native data set was collected from a single flash-cooled crystal (100 K) using 20%(v/v) glycerol as a cryoprotectant. These crystals belonged to space group P2(1)2(1)2, with unit-cell parameters a = 53.5, b = 81.7, c = 85.2 A, alpha = beta = gamma = 90 degrees . One molecule is assumed to be present per asymmetric unit, which gives a Matthews coefficient of 2.5 A(3) Da(-1). A data set was also collected to 1.7 A resolution from a selenomethionyl derivative; it belonged to space group P2(1)2(1)2(1) with the same unit-cell parameters as the native crystals.

摘要

FnCel5A是一种耐热内切葡聚糖酶,属于糖水解酶家族5,可催化嗜热细菌诺氏嗜热栖热菌Rt17 - B1中纤维素水解为葡萄糖。FnCel5A因其高耐热性(最适温度T(opt)=353 K,半衰期48小时)以及对羧甲基纤维素的高比活性而格外引人注目。这些特性使得FnCel5A成为蛋白质工程中改善纤维素酶活性的一个有吸引力的目标。为了解析FnCel5A的晶体结构并更好地理解其生物学功能,使用NaH₂PO₄/KH₂PO₄作为沉淀剂,在291 K下表达、纯化并结晶了重组FnCel5A。使用20%(v/v)甘油作为冷冻保护剂,从单个快速冷却的晶体(100 K)收集了分辨率为2.4 Å的天然数据集。这些晶体属于空间群P2₁2₁2,晶胞参数a = 53.5,b = 81.7,c = 85.2 Å,α = β = γ = 90°。每个不对称单元假定存在一个分子,马修斯系数为2.5 ų Da⁻¹。还从硒代甲硫氨酸衍生物收集了分辨率为1.7 Å的数据集;它属于空间群P2₁2₁2₁,具有与天然晶体相同的晶胞参数。

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本文引用的文献

1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Phaser crystallographic software.相位结晶学软件。
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.
3
The cellulase/hemicellulase system of the anaerobic fungus Orpinomyces PC-2 and aspects of its applied use.厌氧真菌奥尔平氏菌PC-2的纤维素酶/半纤维素酶系统及其应用方面。
Ann N Y Acad Sci. 2008 Mar;1125:308-21. doi: 10.1196/annals.1419.030.
4
A short history of SHELX.SHELX简史。
Acta Crystallogr A. 2008 Jan;64(Pt 1):112-22. doi: 10.1107/S0108767307043930. Epub 2007 Dec 21.
5
Outlook for cellulase improvement: screening and selection strategies.纤维素酶改进展望:筛选与选择策略
Biotechnol Adv. 2006 Sep-Oct;24(5):452-81. doi: 10.1016/j.biotechadv.2006.03.003. Epub 2006 Mar 27.
6
Structure of a full length psychrophilic cellulase from Pseudoalteromonas haloplanktis revealed by X-ray diffraction and small angle X-ray scattering.通过X射线衍射和小角X射线散射揭示的嗜冷性假交替单胞菌全长纤维素酶的结构
J Mol Biol. 2005 May 20;348(5):1211-24. doi: 10.1016/j.jmb.2005.03.026. Epub 2005 Mar 25.
7
Cellulase, clostridia, and ethanol.纤维素酶、梭菌与乙醇。
Microbiol Mol Biol Rev. 2005 Mar;69(1):124-54. doi: 10.1128/MMBR.69.1.124-154.2005.
8
A highly acid-stable and thermostable endo-beta-glucanase from the thermoacidophilic archaeon Sulfolobus solfataricus.来自嗜热嗜酸古菌嗜热栖热菌的一种高度耐酸且耐热的内切β-葡聚糖酶。
Biochem J. 2005 Jan 15;385(Pt 2):581-8. doi: 10.1042/BJ20041388.
9
Analysis of the function of a hyperthermophilic endoglucanase from Pyrococcus horikoshii that hydrolyzes crystalline cellulose.来自嗜热栖热菌的一种水解结晶纤维素的嗜热内切葡聚糖酶的功能分析。
Extremophiles. 2005 Feb;9(1):37-43. doi: 10.1007/s00792-004-0418-z. Epub 2004 Sep 16.
10
Cellulose degrading enzymes and their potential industrial applications.纤维素降解酶及其潜在的工业应用。
Biotechnol Adv. 1997;15(3-4):583-620. doi: 10.1016/s0734-9750(97)00006-2.