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Solitonlike base pair opening in a helicoidal DNA: an analogy with a helimagnet and a cholesteric liquid crystal.

作者信息

Daniel M, Vasumathi V

机构信息

Centre for Nonlinear Dynamics, School of Physics, Bharathidasan University, Tiruchirappalli 620 024, India.

出版信息

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Jan;79(1 Pt 1):012901. doi: 10.1103/PhysRevE.79.012901. Epub 2009 Jan 20.

Abstract

We propose a model for DNA dynamics by introducing the helical structure through twist deformation in analogy with the structure of a helimagnet and a cholesteric liquid-crystal system. The dynamics in this case is found to be governed by the completely integrable sine Gordon equation, which admits kink-antikink solitons with increased width, representing a wide base-pair opening configuration in DNA. The results show that the helicity introduces a length-scale variation and thus provides a better representation of the base-pair opening in DNA.

摘要

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