Suppr超能文献

利用布里渊中子光谱研究蛋白质水合水的集体动力学

Collective dynamics of protein hydration water by brillouin neutron spectroscopy.

作者信息

Orecchini Andrea, Paciaroni Alessandro, De Francesco Alessio, Petrillo Caterina, Sacchetti Francesco

机构信息

Dipartimento di Fisica, Università degli Studi di Perugia, Via Pascoli I-06123 Perugia, Italy.

出版信息

J Am Chem Soc. 2009 Apr 8;131(13):4664-9. doi: 10.1021/ja807957p.

Abstract

By a detailed experimental study of THz dynamics in the ribonuclease protein, we could detect the propagation of coherent collective density fluctuations within the protein hydration shell. The emerging picture indicates the presence of both a dispersing mode, traveling with a speed greater than 3000 m/s, and a nondispersing one, characterized by an almost constant energy of 6-7 meV. In agreement with molecular dynamics simulations [Phys. Rev. Lett. 2002, 89, 275501], the features of the dispersion curves closely resemble those observed in pure liquid water [Phys. Rev. E: Stat. Phys., Plasmas, Fluids, Relat. Interdiscip. Top. 2004, 69, 061203]. On the contrary, the observed damping factors are much larger than in bulk water, with the dispersing mode becoming overdamped at Q = 0.6 A(-1) already. Such novel experimental findings are discussed as a dynamic signature of the disordering effect induced by the protein surface on the local structure of water.

摘要

通过对核糖核酸酶蛋白中太赫兹动力学的详细实验研究,我们能够检测到蛋白质水合壳层内相干集体密度涨落的传播。新出现的情况表明,既存在一种以大于3000米/秒的速度传播的色散模式,也存在一种以几乎恒定的6 - 7毫电子伏能量为特征的非色散模式。与分子动力学模拟结果[《物理评论快报》2002年,第89卷,275501]一致,色散曲线的特征与在纯液态水中观察到的特征[《物理评论E:统计物理、等离子体、流体、相关交叉学科主题》2004年,第69卷,061203]非常相似。相反,观察到的阻尼因子比在 bulk 水中大得多,色散模式在Q = 0.6 Å⁻¹时就已经变成过阻尼状态。这些新的实验发现被作为蛋白质表面对水的局部结构所引起的无序效应的动态特征进行了讨论。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验