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由宿主适应性驱动的基因组进化导致了一种毒性更强且具有抗微生物抗性的14型肺炎链球菌。

Genome evolution driven by host adaptations results in a more virulent and antimicrobial-resistant Streptococcus pneumoniae serotype 14.

作者信息

Ding Feng, Tang Petrus, Hsu Mei-Hua, Cui Peng, Hu Songnian, Yu Jun, Chiu Cheng-Hsun

机构信息

The CAS Key Laboratory of Genome Sciences and Information, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, PR China.

出版信息

BMC Genomics. 2009 Apr 13;10:158. doi: 10.1186/1471-2164-10-158.

Abstract

BACKGROUND

Streptococcus pneumoniae serotype 14 is one of the most common pneumococcal serotypes that cause invasive pneumococcal diseases worldwide. Serotype 14 often expresses resistance to a variety of antimicrobial agents, resulting in difficulties in treatment. To gain insight into the evolution of virulence and antimicrobial resistance traits in S. pneumoniae from the genome level, we sequenced the entire genome of a serotype 14 isolate (CGSP14), and carried out comprehensive comparison with other pneumococcal genomes. Multiple serotype 14 clinical isolates were also genotyped by multilocus sequence typing (MLST).

RESULTS

Comparative genomic analysis revealed that the CGSP14 acquired a number of new genes by horizontal gene transfer (HGT), most of which were associated with virulence and antimicrobial resistance and clustered in mobile genetic elements. The most remarkable feature is the acquisition of two conjugative transposons and one resistance island encoding eight resistance genes. Results of MLST suggested that the major driving force for the genome evolution is the environmental drug pressure.

CONCLUSION

The genome sequence of S. pneumoniae serotype 14 shows a bacterium with rapid adaptations to its lifecycle in human community. These include a versatile genome content, with a wide range of mobile elements, and chromosomal rearrangement; the latter re-balanced the genome after events of HGT.

摘要

背景

肺炎链球菌14型是全球范围内引起侵袭性肺炎球菌疾病的最常见肺炎球菌血清型之一。14型血清型常常对多种抗菌药物表现出耐药性,导致治疗困难。为了从基因组水平深入了解肺炎链球菌毒力和抗菌耐药性特征的演变,我们对一株14型分离株(CGSP14)的全基因组进行了测序,并与其他肺炎球菌基因组进行了全面比较。还通过多位点序列分型(MLST)对多个14型临床分离株进行了基因分型。

结果

比较基因组分析表明,CGSP14通过水平基因转移(HGT)获得了许多新基因,其中大多数与毒力和抗菌耐药性相关,并聚集在可移动遗传元件中。最显著的特征是获得了两个接合转座子和一个编码八个耐药基因的耐药岛。MLST结果表明,基因组进化的主要驱动力是环境药物压力。

结论

肺炎链球菌14型的基因组序列显示出一种能在人类群体中快速适应其生命周期的细菌。这些包括具有广泛移动元件和染色体重排的多功能基因组内容;后者在HGT事件后重新平衡了基因组。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f708/2678160/f0bba9928c34/1471-2164-10-158-1.jpg

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