Schmidt T, Zavrel M, Spiess A, Ansorge-Schumacher M B
Chair of Biotechnology, RWTH Aachen University, Worringerweg 1, D-52074 Aachen, Germany.
Bioorg Chem. 2009 Jun;37(3):84-9. doi: 10.1016/j.bioorg.2009.03.001. Epub 2009 Mar 17.
Benzaldehyde lyase from Pseudomonas fluorescens (BAL, EC 4.1.2.38) is a versatile catalyst for stereoselective carboligations. Nevertheless, rather inconsistent data about its biochemical properties are reported in literature. In this study, the dependency of BAL activity on ionic strength, pH, and concentration of DMSO was for the first time systematically investigated and interpreted. It was found that the activity of BAL strongly depends on all three parameters, and a correlation exists between the dependency on pH and DMSO concentration. This correlation could be explained by an interaction of DMSO with an ionic amino acid in the catalytic site. A model-based analysis indicated that the pK(a) of this residue shifts to the alkaline milieu upon addition of DMSO. Consequently, the optimum pH also shifts to alkaline values when DMSO is present. Potentiometric experiments confirmed that the pK(a) can most probably be attributed to Glu50 which governs the activity increase of BAL on the acidic limb of its pH-activity profile. With these findings, the apparently contradicting data from literature become comprehensible and optimal reaction conditions for synthesis can easily be deduced.
荧光假单胞菌的苯甲醛裂解酶(BAL,EC 4.1.2.38)是一种用于立体选择性碳连接反应的多功能催化剂。然而,文献中报道的关于其生化特性的数据相当不一致。在本研究中,首次系统地研究并解释了BAL活性对离子强度、pH值和二甲基亚砜(DMSO)浓度的依赖性。结果发现,BAL的活性强烈依赖于这三个参数,并且在对pH值的依赖性和DMSO浓度之间存在相关性。这种相关性可以通过DMSO与催化位点中的离子氨基酸相互作用来解释。基于模型的分析表明,加入DMSO后,该残基的pK(a)向碱性环境移动。因此,当存在DMSO时,最佳pH值也会向碱性值移动。电位实验证实,pK(a)很可能归因于Glu50,它控制着BAL在其pH-活性曲线酸性部分的活性增加。有了这些发现,文献中明显矛盾的数据变得可以理解,并且可以很容易地推导出合成的最佳反应条件。