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第13章. 非核糖体肽合成酶:关键结构域的机制与结构方面

Chapter 13. Nonribosomal peptide synthetases mechanistic and structural aspects of essential domains.

作者信息

Marahiel M A, Essen L-O

机构信息

Biochemistry-Department of Chemistry, Philipps-University Marburg, Marburg, Germany.

出版信息

Methods Enzymol. 2009;458:337-51. doi: 10.1016/S0076-6879(09)04813-7.

Abstract

A widespread class of therapeutically important natural products is of peptidic origin. They are produced nonribosomally by large "assembly line"-like multienzyme complexes, the nonribosomal peptide synthetases (NRPS). In contrast to ribosomal peptide synthesis, nonribosomally assembled peptides contain unique structural features such as D-amino acids, N-terminally attached fatty acid chains, N- and C-methylated amino acids, N-formylated residues, heterocyclic elements, glycosylated amino acids, and phosphorylated residues. In recent research using genetic, biochemical, and structural methods, experiments have revealed profound insights into the molecular mechanism of nonribosomal peptide synthesis. Based on this, it was possible to alter existing nonribosomally produced peptides either by changing their biosynthetic templates or by the combined action of chemical peptide synthesis and subsequent enzyme catalysis. An overview of the structural aspects of the NRPS machinery with a focus on mechanistic and structural aspects of essential domains is presented.

摘要

一类广泛的具有重要治疗意义的天然产物源自肽类。它们由大型的“装配线”样多酶复合物——非核糖体肽合成酶(NRPS)非核糖体合成。与核糖体肽合成不同,非核糖体组装的肽含有独特的结构特征,如D-氨基酸、N-末端连接的脂肪酸链、N-和C-甲基化氨基酸、N-甲酰化残基、杂环元素、糖基化氨基酸和磷酸化残基。在最近使用遗传学、生物化学和结构方法的研究中,实验揭示了对非核糖体肽合成分子机制的深刻见解。基于此,通过改变其生物合成模板或通过化学肽合成与后续酶催化的联合作用,可以改变现有的非核糖体产生的肽。本文概述了NRPS机制的结构方面,重点关注关键结构域的机制和结构方面。

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