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Fe2(S2C3H6)(CO)6基态和激发态势能面的密度泛函理论/含时密度泛函理论研究:[FeFe]氢化酶活性位点的一个简单函数模型

DFT/TDDFT exploration of the potential energy surfaces of the ground state and excited states of Fe2(S2C3H6)(CO)6: a simple functional model of the [FeFe] hydrogenase active site.

作者信息

Bertini Luca, Greco Claudio, De Gioia Luca, Fantucci Piercarlo

机构信息

Department of Biotechnology and Biosciences, Universitá degli Studi di Milano-Bicocca, Piazza della Scienza 2, 20126 Milan, Italy.

出版信息

J Phys Chem A. 2009 May 14;113(19):5657-70. doi: 10.1021/jp809347h.

Abstract

Fe(2)(S(2)C(3)H(6))(CO)(6) (a) is a simple model of the [FeFe] hydrogenase catalytic site. The topology of the potential energy surface (PES) of this complex, of its cationic and anionic species (a(+) and a(-)), and of its lowest triplet state was studied using density functional theory (DFT) with BP86 and B3LYP functionals, while selected low- and high-lying singlet excited states were studied with the time-dependent density functional theory (TDDFT). The global minima of a and a(-) PESs are characterized by an all-terminal CO ligand arrangement, while the two rotated forms are transition states (TS). On the contrary, for the a(+) and lowest triplet state PES, the three forms considered are local minima, and the syn rotated form is the global minimum. The relative stability of the rotated forms and the all-terminal CO form on the a, a(+), and a(-) PESs is discussed in light of the Quantum Theory of Atoms in Molecules (QTAIM) analysis of the electron density. By comparing the Fe-Fe bond features of the three forms for each PES, we found that the global minimum structure is characterized by the shortest Fe-Fe bond distance and highest electron density at the Fe-Fe critical point. This approach gave evidence that in the a rotated forms, the weak Fe-C(mu) interaction between the Fe atom of the unrotated Fe(CO)(3) and the C atom of the semibridged CO is formed to the detriment of the Fe-Fe bond interaction. These results suggest that the stabilization of the rotated forms on the cationic PES might be due to the formation of the weak Fe-C(mu) interaction minimizing the weakening of the Fe-Fe bond. The low-lying and lowest triplet excited-state PES investigated are characterized by the stabilization of the rotated forms over the all-terminal CO ligand arrangement. On the first singlet 1(1)A'' excited-state PES, an Fe(CO)(3) semirotated structure is the lowest-energy stationary point, while the exploration of the 1(1)A' and 2(1)A'' singlet excited PESs evidences the stabilization of the rotated over the all-terminal CO forms. Singlet excited-state optimized geometry results are compared with excited-state nuclear distortions recently obtained from resonance Raman excitation profiles. Finally, the results of the exploration of the 6(1)A' and 9(1)A' high-lying excited PESs are discussed in light of the recent ultraviolet photolysis experiments on a.

摘要

Fe(2)(S(2)C(3)H(6))(CO)(6)(a)是[FeFe]氢化酶催化位点的一个简单模型。使用BP86和B3LYP泛函的密度泛函理论(DFT)研究了该配合物及其阳离子和阴离子物种(a(+)和a(-))以及其最低三重态的势能面(PES)拓扑结构,同时使用含时密度泛函理论(TDDFT)研究了选定的低位和高位单重激发态。a和a(-) PES的全局最小值的特征是所有末端CO配体排列,而两种旋转形式是过渡态(TS)。相反,对于a(+)和最低三重态PES,所考虑的三种形式是局部最小值,并且顺式旋转形式是全局最小值。根据分子中原子的量子理论(QTAIM)对电子密度的分析,讨论了a、a(+)和a(-) PES上旋转形式和所有末端CO形式的相对稳定性。通过比较每个PES的三种形式的Fe-Fe键特征,我们发现全局最小结构的特征是最短的Fe-Fe键距离和Fe-Fe临界点处的最高电子密度。该方法证明,在a旋转形式中,未旋转的Fe(CO)(3)的Fe原子与半桥连CO的C原子之间形成了弱的Fe-C(μ)相互作用,这损害了Fe-Fe键相互作用。这些结果表明,阳离子PES上旋转形式的稳定可能是由于形成了弱的Fe-C(μ)相互作用,从而最小化了Fe-Fe键的减弱。所研究的低位和最低三重激发态PES的特征是旋转形式相对于所有末端CO配体排列的稳定。在第一单重1(1)A''激发态PES上,Fe(CO)(3)半旋转结构是能量最低的驻点,而对1(1)A'和2(1)A''单重激发PES的探索证明了旋转形式相对于所有末端CO形式的稳定。将单重激发态优化几何结构结果与最近从共振拉曼激发轮廓获得的激发态核畸变进行了比较。最后,根据最近对a的紫外光解实验,讨论了6(1)A'和9(1)A'高位激发PES的探索结果。

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