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肽-表面相互作用的基准实验数据集及吸附自由能评估

Benchmark experimental data set and assessment of adsorption free energy for peptide-surface interactions.

作者信息

Wei Yang, Latour Robert A

机构信息

Department of Bioengineering, 501 Rhodes Engineering Research Center, Clemson University, Clemson, South Carolina 29634, USA.

出版信息

Langmuir. 2009 May 19;25(10):5637-46. doi: 10.1021/la8042186.

Abstract

With the increasing interest in protein adsorption in fields ranging from bionanotechnology to biomedical engineering, there is a growing need to understand protein-surface interactions at a fundamental level, such as the interaction between individual amino acid residues of a protein and functional groups presented by a surface. However, relatively little data are available that experimentally provide a quantitative, comparative measure of these types of interactions. To address this deficiency, the objective of this study was to generate a database of experimentally measured standard state adsorption free energy (DeltaGoads) values for a wide variety of amino acid residue-surface interactions using a host-guest peptide and alkanethiol self-assembled monolayers (SAMs) with polymer-like functionality as the model system. The host-guest amino acid sequence was synthesized in the form of TGTG-X-GTGT, where G and T are glycine and threonine amino acid residues and X represents a variable residue. In this paper, we report DeltaGoads values for the adsorption of 12 different types of the host-guest peptides on a set of nine different SAM surfaces, for a total of 108 peptide-surface systems. The DeltaGoads values for these 108 peptide-surface combinations show clear trends in adsorption behavior that are dependent on both peptide composition and surface chemistry. These data provide a benchmark experimental data set from which fundamental interactions that govern peptide and protein adsorption behavior can be better understood and compared.

摘要

随着从生物纳米技术到生物医学工程等领域对蛋白质吸附的兴趣日益增加,越来越需要从根本层面理解蛋白质与表面的相互作用,例如蛋白质单个氨基酸残基与表面呈现的官能团之间的相互作用。然而,通过实验提供这些类型相互作用的定量、比较性度量的数据相对较少。为了弥补这一不足,本研究的目的是使用主客体肽和具有类聚合物功能的烷硫醇自组装单分子层(SAMs)作为模型系统,生成一个关于各种氨基酸残基 - 表面相互作用的实验测量标准态吸附自由能(ΔGoads)值的数据库。主客体氨基酸序列以TGTG - X - GTGT的形式合成,其中G和T分别是甘氨酸和苏氨酸氨基酸残基,X代表可变残基。在本文中,我们报告了12种不同类型的主客体肽在一组9种不同SAM表面上吸附的ΔGoads值,总共108个肽 - 表面系统。这108个肽 - 表面组合的ΔGoads值显示出吸附行为的明显趋势,这些趋势取决于肽的组成和表面化学。这些数据提供了一个基准实验数据集,从中可以更好地理解和比较支配肽和蛋白质吸附行为的基本相互作用。

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