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用于分析亚线性剂量-反应关系的阈值剂量及其置信限的统计模型,以突变数据为例。

Statistical model to estimate a threshold dose and its confidence limits for the analysis of sublinear dose-response relationships, exemplified for mutagenicity data.

机构信息

Department of Toxicology, University of Würzburg, Versbacher Str. 9, 97078 Würzburg, Germany.

出版信息

Mutat Res. 2009 Aug;678(2):118-22. doi: 10.1016/j.mrgentox.2009.05.010. Epub 2009 May 27.

Abstract

Strongly sublinear dose-response relationships (slope increasing with dose) raise the question about a putative threshold dose below which no biologically relevant effect would be expected. A mathematical threshold with a break in the curve at the threshold dose is generally rejected for consequences of genotoxicity such as mutation, because proportionality between low dose and the rate of DNA-adduct formation is a reasonable hypothesis. In view of an increasing database for distinct deviation from linearity for mutagenicity, we offer a statistical model to analyze continuous response data and estimate a threshold dose together with its confidence limits, thereby taking data quality and degree of sublinearity into account. The simplest mathematical threshold model is a hockey stick defined by a low-dose part with slope zero at background level a to a theoretical break point at threshold dose td, followed by a linear increase above td with slope b. The function is y (dose d)=a+bx(d-td)x1([d>td]). Using the free statistics software package "R", we make a procedure available to estimate the parameters a, b, and td. Confidence intervals are calculated for all parameters at a significance level that can be defined by the user. If the lower limit of the confidence interval for td is >0, linearity is rejected. The procedure is illustrated by two examples. A small data set with three replicates per dose group, indicating a threshold for the induction of thymidine kinase mutants in L5178Y tk(+/-) mouse lymphoma cells treated with methyl methanesulfonate, did not achieve significance. On the other hand, the large data set reported in this issue (Gocke et al.) on lacZ mutants in bone marrow cells of transgenic mice treated with ethyl methanesulfonate strongly favoured the hockey stick model. The question of a theoretically expected linear dose-related increase below the threshold dose is addressed by linear regression of the data below the break point and estimation of an upper limit of the slope. The question of biological relevance of the resulting slope is discussed against the normal variation of background measures in the control group.

摘要

强亚线性剂量-反应关系(斜率随剂量增加而增加)引发了一个问题,即是否存在一个假定的阈值剂量,低于该剂量不会产生任何有生物学意义的效应。对于遗传毒性的后果,如突变,一般会拒绝使用曲线在阈值剂量处出现中断的数学阈值,因为低剂量与 DNA 加合物形成速率之间的比例关系是一个合理的假设。鉴于关于致突变性明显偏离线性的数据库不断增加,我们提供了一个统计模型来分析连续反应数据,并估计阈值剂量及其置信限,从而考虑到数据质量和亚线性程度。最简单的数学阈值模型是一个曲棍球棒,由背景水平 a 处的零斜率低剂量部分定义,到阈值剂量 td 处的理论断点,然后在 td 以上线性增加,斜率为 b。该函数为 y(剂量 d)=a+bx(d-td)x1([d>td])。我们使用免费的统计软件包“R”提供了一个程序来估计参数 a、b 和 td。置信区间是在用户定义的显著水平下计算所有参数的。如果 td 的置信区间下限>0,则拒绝线性。该程序通过两个示例进行说明。一个小数据集,每组剂量有三个重复,表明在用甲基甲磺酸处理 L5178Y tk(+/-) 小鼠淋巴瘤细胞时诱导胸苷激酶突变的阈值,没有达到显著水平。另一方面,本期报告的关于用乙基甲磺酸处理转基因小鼠骨髓细胞中的 lacZ 突变体的大型数据集强烈支持曲棍球棒模型。在阈值剂量以下,通过在断点以下对数据进行线性回归并估计斜率的上限,来解决理论上预期的线性剂量相关增加低于阈值剂量的问题。对于由此产生的斜率的生物学相关性问题,将根据对照组中背景测量的正常变化进行讨论。

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