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本文引用的文献

1
Effects of 5-fluouracil combined with sulfasalazine on human pancreatic carcinoma cell line BxPC-3 proliferation and apoptosis in vitro.5-氟尿嘧啶联合柳氮磺胺吡啶对人胰腺癌细胞系BxPC-3体外增殖和凋亡的影响
Hepatobiliary Pancreat Dis Int. 2007 Jun;6(3):312-20.
2
Upregulation of enzymes metabolizing 5-fluorouracil in colorectal cancer.结直肠癌中5-氟尿嘧啶代谢酶的上调
Chemotherapy. 2007;53(1):36-41. doi: 10.1159/000098249. Epub 2006 Dec 28.
3
Solving structures of protein complexes by molecular replacement with Phaser.使用Phaser通过分子置换法解析蛋白质复合物的结构。
Acta Crystallogr D Biol Crystallogr. 2007 Jan;63(Pt 1):32-41. doi: 10.1107/S0907444906045975. Epub 2006 Dec 13.
4
The role of thymidine phosphorylase and uridine phosphorylase in (fluoro)pyrimidine metabolism in peripheral blood mononuclear cells.
Int J Biochem Cell Biol. 2006;38(10):1759-65. doi: 10.1016/j.biocel.2006.04.007. Epub 2006 May 9.
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Coot: model-building tools for molecular graphics.Coot:分子图形的模型构建工具。
Acta Crystallogr D Biol Crystallogr. 2004 Dec;60(Pt 12 Pt 1):2126-32. doi: 10.1107/S0907444904019158. Epub 2004 Nov 26.
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Refinement of macromolecular structures by the maximum-likelihood method.用最大似然法优化大分子结构。
Acta Crystallogr D Biol Crystallogr. 1997 May 1;53(Pt 3):240-55. doi: 10.1107/S0907444996012255.
7
Purification, crystallization and preliminary X-ray analysis of uridine phosphorylase from Salmonella typhimurium.鼠伤寒沙门氏菌尿苷磷酸化酶的纯化、结晶及初步X射线分析
Acta Crystallogr D Biol Crystallogr. 2004 Apr;60(Pt 4):709-11. doi: 10.1107/S0907444904001519. Epub 2004 Mar 23.
8
Crystal structures of Escherichia coli uridine phosphorylase in two native and three complexed forms reveal basis of substrate specificity, induced conformational changes and influence of potassium.大肠杆菌尿苷磷酸化酶两种天然形式和三种复合形式的晶体结构揭示了底物特异性、诱导构象变化及钾离子影响的基础。
J Mol Biol. 2004 Mar 19;337(2):337-54. doi: 10.1016/j.jmb.2004.01.039.
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PHENIX: building new software for automated crystallographic structure determination.PHENIX:用于自动晶体结构测定的新软件构建
Acta Crystallogr D Biol Crystallogr. 2002 Nov;58(Pt 11):1948-54. doi: 10.1107/s0907444902016657. Epub 2002 Oct 21.
10
Uridine phosphorylase (-/-) murine embryonic stem cells clarify the key role of this enzyme in the regulation of the pyrimidine salvage pathway and in the activation of fluoropyrimidines.尿苷磷酸化酶(-/-)小鼠胚胎干细胞阐明了该酶在嘧啶补救途径调节和氟嘧啶激活中的关键作用。
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鼠伤寒沙门氏菌尿苷磷酸化酶与5-氟尿嘧啶复合物的结晶及初步X射线衍射分析。

Crystallization and preliminary X-ray diffraction analysis of Salmonella typhimurium uridine phosphorylase complexed with 5-fluorouracil.

作者信息

Lashkov A A, Gabdoulkhakov A G, Shtil A A, Mikhailov A M

机构信息

A. V. Shubnikov Institute of Crystallography, Russian Academy of Sciences, Leninskiy Prospect 59, 119333 Moscow, Russia.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Jun 1;65(Pt 6):601-3. doi: 10.1107/S1744309109016133. Epub 2009 May 22.

DOI:10.1107/S1744309109016133
PMID:19478441
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2688420/
Abstract

Uridine phosphorylase (UPh; EC 2.4.2.3) catalyzes the phosphorolytic cleavage of the N-glycosidic bond of uridine to form ribose 1-phosphate and uracil. This enzyme also activates pyrimidine-containing drugs, including 5-fluorouracil (5-FU). In order to better understand the mechanism of the enzyme-drug interaction, the complex of Salmonella typhimurium UPh with 5-FU was cocrystallized using the hanging-drop vapour-diffusion method at 294 K. X-ray diffraction data were collected to 2.2 A resolution. Analysis of these data revealed that the crystal belonged to space group C2, with unit-cell parameters a = 158.26, b = 93.04, c = 149.87 A, alpha = gamma = 90, beta = 90.65 degrees . The solvent content was 45.85% assuming the presence of six hexameric molecules of the complex in the unit cell.

摘要

尿苷磷酸化酶(UPh;EC 2.4.2.3)催化尿苷的N-糖苷键进行磷酸解裂解,形成1-磷酸核糖和尿嘧啶。该酶还能激活含嘧啶的药物,包括5-氟尿嘧啶(5-FU)。为了更好地理解酶与药物相互作用的机制,采用悬滴气相扩散法在294 K下使鼠伤寒沙门氏菌UPh与5-FU的复合物共结晶。收集了分辨率为2.2 Å的X射线衍射数据。对这些数据的分析表明,该晶体属于空间群C2,晶胞参数为a = 158.26、b = 93.04、c = 149.87 Å,α = γ = 90°,β = 90.65°。假设晶胞中存在六个复合物的六聚体分子,则溶剂含量为45.85%。