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孤挺花致病相关蛋白——孤挺灵的分离、纯化、结晶及初步晶体学研究

Isolation, purification, crystallization and preliminary crystallographic studies of amaryllin, a plant pathogenesis-related protein from Amaryllis belladonna.

作者信息

Kumar Sanjit, Singh Nagendra, Sinha Mau, Kaur Punit, Srinivasan A, Sharma Sujata, Singh T P

机构信息

Department of Biophysics, All India Institute of Medical Sciences, New Delhi 110029, India.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Jun 1;65(Pt 6):635-7. doi: 10.1107/S174430910901745X. Epub 2009 May 23.

Abstract

A novel antifungal protein, amaryllin, has been isolated from the underground bulbs of Amaryllis belladonna, purified to homogeneity and crystallized. The protein was extracted using ammonium sulfate fractionation. The purified protein samples indicated a molecular weight of 15 kDa on SDS-PAGE. The protein showed antifungal activity against Aspergillus flavus and Fusarium oxysporum. The N-terminal sequence of the first 15 amino-acid residues was determined using Edman degradation and did not show significant sequence identity to any known protein. The protein was crystallized using the hanging-drop vapour-diffusion method with 30% PEG 8000 as precipitating agent. The crystals diffracted to 2.7 A resolution and belonged to the orthorhombic space group I222 or I2(1)2(1)2(1), with unit-cell parameters a = 48.6, b = 61.9, c = 79.6 A. The complete sequence and structure determination of amaryllin are in progress.

摘要

一种新型抗真菌蛋白——孤挺花蛋白,已从孤挺花的地下鳞茎中分离出来,纯化至同质并结晶。该蛋白采用硫酸铵分级分离法提取。纯化后的蛋白样品在SDS-PAGE上显示分子量为15 kDa。该蛋白对黄曲霉和尖孢镰刀菌具有抗真菌活性。使用埃德曼降解法测定了前15个氨基酸残基的N端序列,未显示与任何已知蛋白有显著的序列同一性。该蛋白采用悬滴气相扩散法,以30% PEG 8000作为沉淀剂进行结晶。晶体衍射分辨率为2.7 Å,属于正交晶系空间群I222或I2(1)2(1)2(1),晶胞参数a = 48.6、b = 61.9、c = 79.6 Å。孤挺花蛋白的完整序列和结构测定正在进行中。

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