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用于药物发现的计算映射工具。

Computational mapping tools for drug discovery.

作者信息

Ivanenkov Yan A, Savchuk Nikolay P, Ekins Sean, Balakin Konstantin V

机构信息

ChemDiv Inc., 6605 Nancy Ridge Drive, San Diego, CA 92121, USA.

出版信息

Drug Discov Today. 2009 Aug;14(15-16):767-75. doi: 10.1016/j.drudis.2009.05.016. Epub 2009 Jun 9.

DOI:10.1016/j.drudis.2009.05.016
PMID:19520185
Abstract

During the past decade, computational technologies have become well integrated in the modern drug design process and have gained in influence. They have dramatically revolutionized the way in which we approach drug discovery, leading to the explosive growth in the amount of chemical and biological data that are typically multidimensional in structure. As a result, the irresistible rush towards using computational approaches has focused on dimensionality reduction and the convenient representation of high-dimensional data sets. This has, in turn, led to the development of advanced machine-learning algorithms. In this review we describe a variety of conceptually different mapping techniques that have attracted the attention of researchers because they allow analysis of complex multidimensional data in an intuitively comprehensible visual manner.

摘要

在过去十年中,计算技术已很好地融入现代药物设计过程并影响力不断增强。它们极大地改变了我们进行药物发现的方式,导致通常具有多维结构的化学和生物学数据量呈爆炸式增长。因此,使用计算方法的不可阻挡的热潮聚焦于降维和高维数据集的便捷表示。这反过来又推动了先进机器学习算法的发展。在本综述中,我们描述了各种在概念上不同的映射技术,这些技术吸引了研究人员的关注,因为它们能够以直观易懂的视觉方式分析复杂的多维数据。

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