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来自耐辐射球菌的与细菌对DNA损伤耐受性相关的DNA聚合酶X被表征为一种短片段碱基切除修复聚合酶。

DNA polymerase X from Deinococcus radiodurans implicated in bacterial tolerance to DNA damage is characterized as a short patch base excision repair polymerase.

作者信息

Khairnar Nivedita P, Misra Hari S

机构信息

Molecular Biology Division, Bhabha Atomic Research Centre, Mumbai-400 085, India.

出版信息

Microbiology (Reading). 2009 Sep;155(Pt 9):3005-3014. doi: 10.1099/mic.0.029223-0. Epub 2009 Jun 18.

Abstract

The Deinococcus radiodurans R1 genome encodes an X-family DNA repair polymerase homologous to eukaryotic DNA polymerase beta. The recombinant deinococcal polymerase X (PolX) purified from transgenic Escherichia coli showed deoxynucleotidyltransferase activity. Unlike the Klenow fragment of E. coli, this enzyme showed short patch DNA synthesis activity on heteropolymeric DNA substrate. The recombinant enzyme showed 5'-deoxyribose phosphate (5'-dRP) lyase activity and base excision repair function in vitro, with the help of externally supplied glycosylase and AP endonuclease functions. A polX disruption mutant of D. radiodurans expressing 5'-dRP lyase and a truncated polymerase domain was comparatively less sensitive to gamma-radiation than a polX deletion mutant. Both mutants showed higher sensitivity to hydrogen peroxide. Excision repair mutants of E. coli expressing this polymerase showed functional complementation of UV sensitivity. These results suggest the involvement of deinococcal polymerase X in DNA-damage tolerance of D. radiodurans, possibly by contributing to DNA double-strand break repair and base excision repair.

摘要

耐辐射球菌R1的基因组编码一种与真核生物DNA聚合酶β同源的X家族DNA修复聚合酶。从转基因大肠杆菌中纯化得到的重组耐辐射球菌聚合酶X(PolX)表现出脱氧核苷酸转移酶活性。与大肠杆菌的Klenow片段不同,该酶在异聚DNA底物上表现出短片段DNA合成活性。在外部提供的糖基化酶和AP内切核酸酶功能的帮助下,重组酶在体外表现出5'-脱氧核糖磷酸(5'-dRP)裂解酶活性和碱基切除修复功能。表达5'-dRP裂解酶和截短聚合酶结构域的耐辐射球菌polX破坏突变体对γ辐射的敏感性比polX缺失突变体相对较低。两种突变体对过氧化氢均表现出更高的敏感性。表达这种聚合酶的大肠杆菌切除修复突变体表现出对紫外线敏感性的功能互补。这些结果表明,耐辐射球菌聚合酶X可能通过促进DNA双链断裂修复和碱基切除修复参与耐辐射球菌的DNA损伤耐受。

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