Shiratori Hatsumi, Sasaya Kinuyo, Ohiwa Hitomi, Ikeno Hironori, Ayame Shohei, Kataoka Naoaki, Miya Akiko, Beppu Teruhiko, Ueda Kenji
Life Science Research Center, College of Bioresource Sciences, Nihon University, 1866 Kameino, Fujisawa 252-8510, Japan.
Int J Syst Evol Microbiol. 2009 Jul;59(Pt 7):1764-70. doi: 10.1099/ijs.0.003483-0. Epub 2009 Jun 19.
Two novel anaerobic, moderately thermophilic and cellulose-/cellobiose-digesting bacteria, EBR45(T) and EBR596(T), were isolated from anaerobic sludge of a cellulose-degrading methanogenic bioreactor. Phylogenetic analysis based on 16S rRNA gene sequences indicated that these strains belonged to cluster III within the low-G+C-content Gram-positive bacteria. The close relatives of EBR45(T) were Clostridium straminisolvens DSM 16021(T) (sequence identity, 94.6 %) and Clostridium thermocellum DSM 1237(T) (93.4 %). The closest relative of EBR596(T) was Clostridium stercorarium DSM 8532(T) (95.9 %). Both isolates were rod-shaped sporulators, growing optimally at 60 degrees C. EBR45(T) was Gram-staining-reaction-variable and non-motile, formed bright-yellow colonies on solid media, and grew on a relatively narrow range of carbohydrates including cellulose and cellobiose. EBR596(T) was Gram-staining-reaction-negative and motile, formed glossy white colonies and grew on cellobiose and various carbohydrates except cellulose. Major fatty acid compositions were 16 : 0 iso, 16 : 0 and 16 : 0 dimethylacetal (strain EBR45(T)) and 15 : 0 iso, 16 : 0 iso, 15 : 0 anteiso and 17 : 0 anteiso (strain EBR596(T)). The DNA G+C contents were 36.9 mol% (EBR45(T)) and 51.1 mol% (EBR596(T)). Based on the phenotypic and phylogenetic data and genomic distinctiveness, strains EBR45(T) and EBR596(T) represent two novel species, for which the names Clostridium clariflavum sp. nov. (type strain EBR45(T) =DSM 19732(T) =NBRC 101661(T)) and Clostridium caenicola sp. nov. (type strain EBR596(T) =DSM 19027(T) =NBRC 102590(T)) are proposed.
从一个降解纤维素的产甲烷生物反应器的厌氧污泥中分离出两株新型厌氧、嗜热适度且能消化纤维素/纤维二糖的细菌,即EBR45(T)和EBR596(T)。基于16S rRNA基因序列的系统发育分析表明,这些菌株属于低G+C含量革兰氏阳性菌中的第三簇。EBR45(T)的近缘菌是解草梭菌DSM 16021(T)(序列同一性为94.6%)和热纤梭菌DSM 1237(T)(93.4%)。EBR596(T)的最亲近菌是粪堆梭菌DSM 8532(T)(95.9%)。两株分离菌均为杆状产芽孢菌,在60℃时生长最佳。EBR45(T)革兰氏染色反应可变且无运动性,在固体培养基上形成亮黄色菌落,能在包括纤维素和纤维二糖在内的较窄范围碳水化合物上生长。EBR596(T)革兰氏染色反应为阴性且有运动性,形成光滑白色菌落,能在纤维二糖及除纤维素外的多种碳水化合物上生长。主要脂肪酸组成为16 : 0异戊酸、16 : 0和16 : 0二甲基缩醛(菌株EBR45(T))以及15 : 0异戊酸、16 : 0异戊酸、15 : 0anteiso和17 : 0anteiso(菌株EBR596(T))。DNA的G+C含量分别为36.9 mol%(EBR45(T))和51.1 mol%(EBR596(T))。基于表型、系统发育数据及基因组独特性,菌株EBR45(T)和EBR596(T)代表两个新物种,分别提议命名为明黄梭菌(Clostridium clariflavum)sp. nov.(模式菌株EBR45(T)=DSM 19732(T)=NBRC 101661(T))和土栖梭菌(Clostridium caenicola)sp. nov.(模式菌株EBR596(T)=DSM 19027(T)=NBRC 102590(T))。