Alguacil M M, Roldán A, Torres M P
CSIC-Centro de Edafología y Biología Aplicada del Segura, Department of Soil and Water Conservation, Campus de Espinardo 30100-Murcia, Spain.
Environ Microbiol. 2009 Oct;11(10):2649-59. doi: 10.1111/j.1462-2920.2009.01990.x. Epub 2009 Jun 30.
In the present study, we used PCR-Single-Stranded Conformation Polymorphism (SSCP) techniques to analyse arbuscular mycorrhizal fungi (AMF) communities in four sites within a 10 km(2) gypsum area in Southern Spain. Four common plant species from these ecosystems were selected. The AM fungal small-subunit (SSU) rRNA genes were subjected to PCR, cloning, SSCP analysis, sequencing and phylogenetic analyses. A total of 1443 SSU rRNA sequences were analysed, for 21 AM fungal types: 19 belonged to the genus Glomus, 1 to the genus Diversispora and 1 to the Scutellospora. Four sequence groups were identified, which showed high similarity to sequences of known glomalean species or isolates: Glo G18 to Glomus constrictum, Glo G1 to Glomus intraradices, Glo G16 to Glomus clarum, Scut to Scutellospora dipurpurescens and Div to one new genus in the family Diversisporaceae identified recently as Otospora bareai. There were three sequence groups that received strong support in the phylogenetic analysis, and did not seem to be related to any sequences of AM fungi in culture or previously found in the database; thus, they could be novel taxa within the genus Glomus: Glo G4, Glo G2 and Glo G14. We have detected the presence of both generalist and potential specialist AMF in gypsum ecosystems. The AMF communities were different in the plant studied suggesting some degree of preference in the interactions between these symbionts.
在本研究中,我们运用聚合酶链反应-单链构象多态性(PCR-SSCP)技术,对西班牙南部一个10平方公里石膏区域内四个地点的丛枝菌根真菌(AMF)群落进行了分析。从这些生态系统中选取了四种常见植物物种。对AM真菌的小亚基(SSU)rRNA基因进行了PCR、克隆、SSCP分析、测序及系统发育分析。共分析了1443条SSU rRNA序列,分属于21种AM真菌类型:19种属于球囊霉属,1种属于多样孢囊霉属,1种属于盾巨孢囊霉属。鉴定出四个序列组,它们与已知球囊霉目物种或分离株的序列具有高度相似性:Glo G18与缩球囊霉相似,Glo G1与根内球囊霉相似,Glo G16与明球囊霉相似,Scut与双网盾巨孢囊霉相似,Div与最近在多样孢囊霉科中鉴定为巴氏耳孢霉的一个新属相似。有三个序列组在系统发育分析中得到有力支持,且似乎与培养的AM真菌序列或数据库中先前发现的序列均无关联;因此,它们可能是球囊霉属内的新分类单元:Glo G4、Glo G2和Glo G14。我们在石膏生态系统中检测到了广适性和潜在专性AMF的存在。在所研究的植物中,AMF群落存在差异,这表明这些共生体之间的相互作用存在一定程度的偏好。