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通过将电洗脱与整体式固相萃取相结合从琼脂糖凝胶切片中快速回收DNA

Rapid recovery of DNA from agarose gel slices by coupling electroelution with monolithic SPE.

作者信息

Yu Shengbing, Yang Shuixian, Zhou Ping, Zhou Ke, Wang Jing, Chen Xiangdong

机构信息

College of Chemistry and Molecular Sciences, Wuhan University, Wuhan, PR China.

出版信息

Electrophoresis. 2009 Jun;30(12):2110-6. doi: 10.1002/elps.200800777.

Abstract

An amino silica monolithic column prepared by in situ polymerization of tetraethoxysilane and N-(beta-aminoethyl)-gamma-aminopropyltriethoxysilane was firstly applied to recover DNA from agarose gel slices by coupling electroelution with monolithic SPE. DNA was electroeluted from the agarose gel slices onto the amino silica monolithic column. The DNA adsorbed on this monolithic column was then recovered using sodium phosphate solution at pH 10. The whole recovery procedure could be completed within 10 min because the use of amino silica monolithic column accelerated the DNA capture and facilitated the DNA release. Electroelution conditions, such as buffer pH, buffer concentration and applied voltage, were online optimized. The average yield for herring sperm DNA, pBR 322 DNA and lambda DNA recovered from 1.0% w/v agarose gel slices were 55+/-4, 50+/-6 and 42+/-7% (n=3), respectively. The polymerase chain reaction performance of pGM plasmid recovered from agarose gel slices demonstrated that the method could provide high-quality DNA for downstream processes. The combination of electroelution with monolithic SPE allows a rapid, simple and efficient DNA recovery method. This technique is especially useful for applications that need to purify small starting amounts of DNA.

摘要

通过四乙氧基硅烷和N-(β-氨乙基)-γ-氨丙基三乙氧基硅烷原位聚合制备的氨基硅胶整体柱首次应用于通过整体固相萃取与电洗脱联用从琼脂糖凝胶切片中回收DNA。DNA从琼脂糖凝胶切片上电洗脱到氨基硅胶整体柱上。然后使用pH 10的磷酸钠溶液回收吸附在该整体柱上的DNA。由于使用氨基硅胶整体柱加速了DNA捕获并促进了DNA释放,整个回收过程可在10分钟内完成。在线优化了电洗脱条件,如缓冲液pH值、缓冲液浓度和施加电压。从1.0% w/v琼脂糖凝胶切片中回收的鲱鱼精DNA、pBR 322 DNA和λDNA的平均回收率分别为55±4%、50±6%和42±7%(n = 3)。从琼脂糖凝胶切片中回收的pGM质粒的聚合酶链反应性能表明该方法可为下游过程提供高质量的DNA。电洗脱与整体固相萃取联用提供了一种快速、简单且高效的DNA回收方法。该技术对于需要纯化少量起始DNA的应用特别有用。

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