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新热带区鲀形目鱼类基因组大小评估。

Genome size evaluation in Tetraodontiform fishes from the Neotropical region.

机构信息

Departamento de Genética, Universidade Federal do Paraná, Curitiba, PR, Brazil.

出版信息

Mar Biotechnol (NY). 2009 Nov-Dec;11(6):680-5. doi: 10.1007/s10126-009-9215-0. Epub 2009 Jul 10.

Abstract

Smooth pufferfish of the family Tetraodontidae had become pure genomic models because of the remarkable compaction of their genome. This trait seems to be the result of DNA loss following its divergence from the sister family Diodontidae, which possess larger genomes. In this study, flow cytometry was used for estimate the genome size of four pufferfish species from the Neotropical region. Cytogenetic data and confocal microscopy were also used attempting to confirm relationships between DNA content and cytological parameters. The haploid genome size was 0.71 + or - 0.03 pg for Sphoeroides greeleyi, 0.34 + or - 0.01 pg for Sphoeroides spengleri, 0.82 + or - 0.03 pg for Sphoeroides testudineus (all Tetraodontidae), and 1.00 + or - 0.03 pg for Chilomycterus spinosus (Diodontidae). These differences are not related with ploidy level, because 46 chromosomes are considered basal for both families. The value for S. spengleri represents the smallest vertebrate genome reported to date. Since erythrocyte cell and nuclear sizes are strongly correlated with genome size, the variation in this last is considered under both adaptive and evolutionary perspectives.

摘要

由于其基因组的显著压缩,四齿鲀科的光滑鲀成为了纯粹的基因组模型。这种特性似乎是它们从姐妹科鳞鲀科分化出来后 DNA 丢失的结果,鳞鲀科拥有更大的基因组。在这项研究中,使用流式细胞术估计了来自新热带地区的四种鲀鱼物种的基因组大小。还使用细胞遗传学数据和共聚焦显微镜试图确认 DNA 含量与细胞学参数之间的关系。单倍体基因组大小为 Sphoeroides greeleyi 的 0.71 ± 0.03 pg、Sphoeroides spengleri 的 0.34 ± 0.01 pg、Sphoeroides testudineus(均为四齿鲀科)的 0.82 ± 0.03 pg 和 Chilomycterus spinosus(鳞鲀科)的 1.00 ± 0.03 pg。这些差异与倍性水平无关,因为这两个科的基础染色体数都是 46 条。Sphoeroides spengleri 的数值代表了迄今为止报道的最小脊椎动物基因组。由于红细胞大小和核大小与基因组大小密切相关,因此从适应性和进化角度考虑了基因组大小的变化。

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