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跨越健康网格边界:医学成像的早期成果。

Crossing Healthgrid borders: early results in medical imaging.

作者信息

Olabarriaga Sílvia, Glatard Tristan, Hoheisel Andreas, Nederveen Aart J, Krefting Dagmar

机构信息

Department of Clinical Epidemiology, Biostatistics and Bioinformatics, Academic Medical Center, University of Amsterdam, NL.

出版信息

Stud Health Technol Inform. 2009;147:62-71.

Abstract

Image analysis has been strongly present in several healthgrid initiatives from the start, and today we find many imaging projects with successful grid implementations and developments. An example is the analysis of functional MRI data on grids, which has been successfully realized by several projects and that could be of interest for others. However, crossing the borders of existing grids is not trivial because the infrastructures being created for these projects differ, each adopting a (slightly) different software stack. This paper describes our early attempts to cross the borders between the German and Dutch grid infrastructures for medical imaging, motivated by a true wish to share expertise about fMRI analysis on grids between these two communities. We describe how we used off-the-shelf, production-level, grid technology to implement supporting mechanisms for cooperation in fMRI at several levels (users, data, software, workflows and computing resources). This simple exercise provided us valuable insights into the problems of crossing the borders of real grids from a user's perspective. Besides technical aspects, we observed that security and usability are very important for the success of inter-operation of Healthgrid.

摘要

从一开始,图像分析就在多个健康网格计划中占据重要地位,如今我们看到许多成像项目在网格实施和开发方面取得了成功。一个例子是在网格上对功能磁共振成像(fMRI)数据进行分析,这已被多个项目成功实现,并且可能会引起其他项目的兴趣。然而,跨越现有网格的边界并非易事,因为为这些项目创建的基础设施各不相同,每个都采用(略有)不同的软件栈。本文描述了我们早期为跨越德国和荷兰医疗成像网格基础设施之间的边界所做的尝试,其动机是真心希望在这两个社区之间分享关于网格上fMRI分析的专业知识。我们描述了如何使用现成的、生产级的网格技术在多个层面(用户、数据、软件、工作流程和计算资源)实现fMRI合作的支持机制。这个简单的实践从用户角度为我们提供了关于跨越实际网格边界问题的宝贵见解。除了技术方面,我们还观察到安全性和可用性对于健康网格互操作的成功非常重要。

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