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嗜纤维素类芽孢杆菌新种,一种源自泰国土壤的纤维素分解细菌。

Paenibacillus cellulositrophicus sp. nov., a cellulolytic bacterium from Thai soil.

作者信息

Akaracharanya Ancharida, Lorliam Wanlapa, Tanasupawat Somboon, Lee Keun Chul, Lee Jung-Sook

机构信息

Department of Microbiology, Chulalongkorn University, Bangkok 10330, Thailand.

出版信息

Int J Syst Evol Microbiol. 2009 Nov;59(Pt 11):2680-4. doi: 10.1099/ijs.0.010298-0. Epub 2009 Jul 22.

Abstract

A cellulolytic bacterium, strain P2-1(T), isolated from soil in Thailand, was characterized using a taxonomic approach based on phenotypic and chemotaxonomic characteristics and the 16S rRNA gene sequence. The novel strain was Gram-positive, facultatively anaerobic, spore-forming and rod-shaped. It contained meso-diaminopimelic as the diagnostic diamino acid in the cell-wall peptidoglycan. The DNA G+C content was 52.7 mol%. The major isoprenoid quinone was MK-7. Anteiso-C(15 : 0) and iso-C(16 : 0) were the dominant cellular fatty acids. Phylogenetic analyses using the 16S rRNA gene sequence showed that the novel strain was affiliated to the genus Paenibacillus. Strain P2-1(T) was closely related to Paenibacillus cineris KCTC 3998(T), P. favisporus KCTC 3910(T) and P. rhizosphaerae KCTC 13015(T) with 96.3-96.5 % gene sequence similarity. DNA-DNA relatedness, physiological characteristics and some biochemical characteristics clearly distinguished strain P2-1(T) from related species of the genus Paenibacillus. Therefore, strain P2-1(T) represents a novel species of the genus Paenibacillus, for which the name Paenibacillus cellulositrophicus sp. nov. is proposed. The type strain is P2-1(T) (=KCTC 13135(T)=PCU 305(T)=TISTR 1888(T)).

摘要

从泰国土壤中分离出的一株纤维素分解菌P2-1(T),采用基于表型、化学分类特征和16S rRNA基因序列的分类方法进行了鉴定。该新菌株为革兰氏阳性菌,兼性厌氧,产芽孢,杆状。其细胞壁肽聚糖中的诊断性二氨基酸为内消旋二氨基庚二酸。DNA G+C含量为52.7 mol%。主要类异戊二烯醌为MK-7。anteiso-C(15 : 0)和iso-C(16 : 0)是主要的细胞脂肪酸。基于16S rRNA基因序列的系统发育分析表明,该新菌株隶属于芽孢杆菌属。菌株P2-1(T)与灰质芽孢杆菌KCTC 3998(T)、嗜孢芽孢杆菌KCTC 3910(T)和根际芽孢杆菌KCTC 13015(T)密切相关,基因序列相似性为96.3-96.5%。DNA-DNA杂交、生理特征和一些生化特征明显区分了菌株P2-1(T)与芽孢杆菌属的相关种。因此,菌株P2-1(T)代表芽孢杆菌属的一个新种,为此提出新名称嗜纤维素芽孢杆菌(Paenibacillus cellulositrophicus sp. nov.)。模式菌株为P2-1(T)(=KCTC 13135(T)=PCU 305(T)=TISTR 1888(T))。

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