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监测多聚体状态下的酶催化作用:利用时间分辨电喷雾电离质谱直接观察节杆菌4-羟基苯甲酰辅酶A硫酯酶催化复合物

Monitoring enzyme catalysis in the multimeric state: direct observation of Arthrobacter 4-hydroxybenzoyl-coenzyme A thioesterase catalytic complexes using time-resolved electrospray ionization mass spectrometry.

作者信息

Li Zhili, Song Feng, Zhuang Zhihao, Dunaway-Mariano Debra, Anderson Karen S

机构信息

Department of Pharmacology, Yale University School of Medicine, New Haven, CT 06520, USA.

出版信息

Anal Biochem. 2009 Nov 15;394(2):209-16. doi: 10.1016/j.ab.2009.07.030. Epub 2009 Jul 25.

Abstract

The ability to examine real-time reaction kinetics for multimeric enzymes in their native state may offer unique insights into understanding the catalytic mechanism and its interplay with three-dimensional structure. In this study, we have used a time-resolved electrospray mass spectrometry approach to probe the kinetic mechanism of 4-hydroxybenzoyl-coenzyme A (4-HBA-CoA) thioesterase from Arthrobacter sp. strain SU in the millisecond time domain. Intact tetrameric complexes of 4-HBA-CoA thioesterase with up to four natural substrate (4-HBA-CoA) molecules bound were detected at times as early as 6 ms using an online rapid-mixing device directly coupled to an electrospray ionization time-of-flight mass spectrometer. Species corresponding to the formation of a folded tetramer of the thioesterase at charge states 16+, 17+, 18+, and 19+ around m/z 3800 were observed and assigned as individual tetramers of thioesterase and noncovalent complexes of the tetramers with up to four substrate and/or product molecules. Real-time evaluation of the reaction kinetics was accomplished by monitoring change in peak intensity corresponding to the substrate and product complexes of the tetrameric protein. The mass spectral data suggest that product 4-HBA is released from the active site of the enzyme prior to the release of product CoA following catalytic turnover. This study demonstrates the utility of this technique to provide additional molecular details for an understanding of the individual enzyme states during the thioesterase catalysis and ability to observe real-time interactions between enzyme and substrates and/or products in the millisecond time range.

摘要

对处于天然状态的多聚体酶的实时反应动力学进行研究,或许能为理解催化机制及其与三维结构的相互作用提供独特的见解。在本研究中,我们采用了时间分辨电喷雾质谱法,在毫秒时间尺度上探究节杆菌属菌株SU的4-羟基苯甲酰辅酶A(4-HBA-CoA)硫酯酶的动力学机制。使用直接与电喷雾电离飞行时间质谱仪相连的在线快速混合装置,早在6毫秒时就检测到了结合有多达四个天然底物(4-HBA-CoA)分子的4-HBA-CoA硫酯酶完整四聚体复合物。在质荷比约为3800处,观察到电荷态为16 +、17 +、18 +和19 +的硫酯酶折叠四聚体形成的对应物种,并将其指定为硫酯酶的单个四聚体以及四聚体与多达四个底物和/或产物分子的非共价复合物。通过监测与四聚体蛋白的底物和产物复合物相对应的峰强度变化,完成了反应动力学的实时评估。质谱数据表明,在催化周转后,产物4-HBA在产物CoA释放之前从酶的活性位点释放。这项研究证明了该技术在为理解硫酯酶催化过程中各个酶状态提供额外分子细节以及在毫秒时间范围内观察酶与底物和/或产物之间实时相互作用方面的实用性。

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