Division of Organic Chemistry and Biochemistry, Ruder Bosković Institute, Bijenicka c. 54, POB 180, Zagreb, 10002, Croatia.
Amino Acids. 2010 Apr;38(4):1185-91. doi: 10.1007/s00726-009-0329-5. Epub 2009 Jul 29.
The capability of a Support Vector Machines QSAR model to predict the antiproliferative ability of small peptides was evaluated by screening a virtual library of enkephalin-like analogs modified by incorporation of the (R,S)-(1-adamantyl)glycine (Aaa) residue. From an initial set of 390 compounds, the peptides, Tyr-Aaa-Gly-Phe-Met (2), Tyr-Aaa-Gly-Phe-Phe (3), Phe-Aaa-Gly-Phe-Phe (4) and Phe-Aaa-Gly-Phe-Met (5) were selected, synthesized and their antitumor activity was tested and compared to that of Met-enkephalin (1). The antiproliferative activity correlated with the computational prediction and with the foldamer-forming ability of the studied peptides. The most active compounds were the hydrophobic peptides, Phe-Aaa-Gly-Phe-Phe (4) and Phe-Aaa-Gly-Phe-Met (5), having a greater propensity to adopt folded structures than the other peptides.
通过筛选经(R,S)-(1-金刚烷基)甘氨酸(Aaa)残基修饰的脑啡肽类似物的虚拟文库,评估了支持向量机 QSAR 模型预测小肽抗增殖能力的能力。从最初的 390 种化合物中,选择了 Tyr-Aaa-Gly-Phe-Met(2)、Tyr-Aaa-Gly-Phe-Phe(3)、Phe-Aaa-Gly-Phe-Phe(4)和 Phe-Aaa-Gly-Phe-Met(5)进行合成,并测试了它们的抗肿瘤活性,并与 Met-enkephalin(1)进行了比较。抗增殖活性与计算预测和研究肽的折叠形成能力相关。最活跃的化合物是疏水性肽 Phe-Aaa-Gly-Phe-Phe(4)和 Phe-Aaa-Gly-Phe-Met(5),它们比其他肽更倾向于形成折叠结构。