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赫氏棘阿米巴:经小鼠脑传代后具有增强毒力的表达基因谱。

Acanthamoeba healyi: expressed gene profiles with enhanced virulence after mouse-brain passage.

作者信息

Xuan Ying-Hua, Hong Yeon-Chul, Lee Yong-Seok, Kang Se-Won, Yu Hak-Sun, Ahn Tae-In, Chung Dong-Il, Kong Hyun-Hee

机构信息

Department of Parasitology, Kyungpook National University, School of Medicine, Taegu 700-422, Republic of Korea.

出版信息

Exp Parasitol. 2009 Nov;123(3):226-30. doi: 10.1016/j.exppara.2009.07.012. Epub 2009 Aug 3.

DOI:10.1016/j.exppara.2009.07.012
PMID:19651124
Abstract

The virulence of Acanthamoeba can be attenuated by long-term in vitro cultivation, and can be recovered by serial mouse-brain passage via intranasal inoculation. Recovery is concomitant with changes in expression of virulence-related genes. To investigate the virulence factors of Acanthamoeba, expressed sequence tags (ESTs) from two kinds of cDNA libraries-long-term in vitro cultivated A. healyi (OLD) and three times mouse-brain passaged A. healyi (MBP)-were compared using reciprocal BLAST analysis, eukaryotic orthologous groups (KOG) assignment, and gene annotation. A total of 938 (OLD) and 1033 (MBP) ESTs were sequenced and resulted in the assembling of 718 OLD and 833 MBP unique sequences. Comparison of the KOG analysis revealed a relatively higher percentage of MBP ESTs in genes related to transcription (K group), amino acid transport and metabolism (E group), coenzyme transport and metabolism (H group), and secondary metabolites biosynthesis, transport and metabolism (Q group). However, a higher percentage of unidentified MBP ESTs (57.9%) than OLD ESTs (28.9%) was evidence of the limited understanding of virulence-related factors of Acanthamoeba. Characterization of the genes expressed during brain passage in mice will be useful in clarifying the pathogenesis of granulomatous amoebic encephalitis by Acanthamoeba.

摘要

棘阿米巴的毒力可通过长期体外培养而减弱,并可通过经鼻接种连续传代小鼠脑内接种来恢复。恢复伴随着毒力相关基因表达的变化。为了研究棘阿米巴的毒力因子,使用双向BLAST分析、真核直系同源组(KOG)分类和基因注释,比较了两种cDNA文库(长期体外培养的棘阿米巴(OLD)和经三次小鼠脑传代的棘阿米巴(MBP))的表达序列标签(EST)。共对938个(OLD)和1033个(MBP)EST进行了测序,分别组装成718个OLD和833个MBP独特序列。KOG分析比较显示,在与转录(K组)、氨基酸转运和代谢(E组)、辅酶转运和代谢(H组)以及次生代谢物生物合成、转运和代谢(Q组)相关的基因中,MBP EST的比例相对较高。然而,未鉴定的MBP EST比例(57.9%)高于OLD EST(28.9%),这表明对棘阿米巴毒力相关因子的了解有限。对小鼠脑传代过程中表达的基因进行表征,将有助于阐明棘阿米巴引起的肉芽肿性阿米巴脑炎的发病机制。

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