Department of Biotechnology, Delft University of Technology, Julianalaan 67, 2628 BC Delft, The Netherlands.
Winogradsky Institute of Microbiology, Russian Academy of Sciences, Prospect 60-let Octyabrya 7/2, 117811 Moscow, Russia.
Int J Syst Evol Microbiol. 2010 Feb;60(Pt 2):444-450. doi: 10.1099/ijs.0.012880-0. Epub 2009 Aug 4.
A moderately halophilic, obligately chemolithoautotrophic, sulfur-oxidizing bacterium, designated strain HRh1(T), was obtained from mixed sediment samples from hypersaline chloride-sulfate lakes in the Kulunda Steppe, in south-western Siberia (Russia), using aerobic enrichment culture at 1 M NaCl with thiocyanate as substrate. Cells of the isolate were short, non-motile rods with a Gram-negative type of cell wall. The bacterium was an obligate aerobe capable of chemolithoautotrophic growth with thiocyanate and thiosulfate. With thiosulfate, it grew at NaCl concentrations of 0.2-3.0 M (optimum 0.5 M) and at pH 6.3-8.0 (optimum pH 7.3-7.5). During growth on thiocyanate, cyanate was identified as an intermediate. The dominant cellular fatty acids were C(16 : 0) and C(18 : 1)omega7. Phylogenetic analysis based on 16S rRNA gene sequencing placed the isolate in the class Gammaproteobacteria as an independent lineage, with an unclassified marine sulfur-oxidizing bacterium as the closest culturable relative (93 % sequence similarity). A single cbbL gene (coding for the key enzyme of the Calvin-Benson cycle of autotrophic CO(2) assimilation) with relatively low similarity to any homologous genes found in chemolithoautotrophs was detected in strain HRh1(T). On the basis of our phenotypic and phylogenetic analysis, the halophilic isolate is proposed to represent a new genus and novel species, Thiohalobacter thiocyanaticus gen. nov., sp. nov. The type strain of Thiohalobacter thiocyanaticus is HRh1(T) (=DSM 21152(T) =UNIQEM U249(T)).
一株中度嗜盐、严格化能自养、硫氧化细菌,命名为 HRh1(T) 株,从西伯利亚西南部库尔unda 草原高盐氯化物-硫酸盐湖中混合沉积物样品中分离得到,采用含有硫氰酸盐作为底物的 1 M NaCl 有氧富集培养。该分离株的细胞为短的、非运动的杆状,具有革兰氏阴性细胞壁类型。该细菌是一种严格需氧的化能自养生物,能够以硫氰酸盐和硫代硫酸盐为底物进行生长。当以硫代硫酸盐为底物时,它在 0.2-3.0 M NaCl(最佳 0.5 M)和 pH6.3-8.0(最佳 pH7.3-7.5)的条件下生长。在以硫氰酸盐为生长底物时,鉴定出氰酸盐为中间产物。主要的细胞脂肪酸为 C(16:0)和 C(18:1)omega7。基于 16S rRNA 基因测序的系统发育分析将该分离株置于γ变形菌纲中,作为一个独立的谱系,与未分类的海洋硫氧化细菌作为最接近的可培养亲缘关系(93%的序列相似性)。在 HRh1(T) 株中检测到一个相对低相似度的 cbbL 基因(编码自养 CO2 同化卡尔文-本森循环的关键酶),与化能自养生物中的任何同源基因都不相似。基于我们的表型和系统发育分析,该嗜盐分离株被提议代表一个新属和新种,即硫氰酸盐硫杆菌属(Thiohalobacter)新属,硫氰酸盐硫杆菌(Thiohalobacter thiocyanaticus)新种。硫氰酸盐硫杆菌(Thiohalobacter thiocyanaticus)的模式株为 HRh1(T)(=DSM 21152(T)=UNIQEM U249(T))。